MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3687c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
rsfB (family_assigned) — STAS domain-containing protein rsfB Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c rsbW (requalified) — anti-sigma B factor RsbW rsbW Rv1354c (requalified) — bifunctional diguanylate cyclase/phosphodiesterase Rv1354c fbiC (requalified) — bifunctional FO biosynthesis protein CofGH fbiC mkl (family_assigned) — ABC transporter ATP-binding protein mkl Rv0258c (requalified) — hypothetical protein Rv0258c rsfA (requalified) — anti-sigma-F factor antagonist RsfA rsfA Rv3351c (family_assigned) — hypothetical protein Rv3351c Rv0247c (family_assigned) — succinate dehydrogenase/fumarate reductase iron-su Rv0247c Rv1904 (requalified) — anti-sigma factor antagonist Rv1904 fdxD (requalified) — ferredoxin fdxD Rv3688c (family_assigned) — GatB/YqeY domain-containing protein Rv3688c Rv2638 (requalified) — anti-sigma factor antagonist Rv2638 sigF (requalified) — RNA polymerase sigma factor SigF sigF usfY (family_assigned) — hypothetical protein usfY moeY (family_assigned) — Rv1355c family protein moeY Rv1353c (family_assigned) — TetR/AcrR family transcriptional regulator C-termi Rv1353c Rv1356c (requalified) — hypothetical protein Rv1356c Rv1358 (family_assigned) — LuxR C-terminal-related transcriptional regulator Rv1358 Rv1357c (requalified) — cyclic diguanylate phosphodiesterase Rv1357c fbiA (requalified) — 2-phospho-L-lactate transferase fbiA thiG (requalified) — thiazole synthase thiG thiC (requalified) — phosphomethylpyrimidine synthase ThiC thiC thiE (requalified) — thiamine phosphate synthase thiE yrbE1A (family_assigned) — ABC transporter permease yrbE1A yrbE1B (family_assigned) — ABC transporter permease yrbE1B yrbE3A (family_assigned) — ABC transporter permease yrbE3A Rv0588 (family_assigned) — ABC transporter permease Rv0588 yrbE4B (family_assigned) — ABC transporter permease yrbE4B yrbE3B (family_assigned) — ABC transporter permease yrbE3B Rv0259c (family_assigned) — sirohydrochlorin chelatase Rv0259c Rv0260c (requalified) — uroporphyrinogen-III synthase Rv0260c lpqM (requalified) — neutral zinc metallopeptidase lpqM Rv0941c (family_assigned) — STAS domain-containing protein Rv0941c Rv1006 (family_assigned) — hypothetical protein Rv1006 Rv3899c (family_assigned) — hypothetical protein Rv3899c Rv3352c (requalified) — oxidoreductase Rv3352c plsB1 (requalified) — lysophospholipid acyltransferase plsB1 Rv3633 (family_assigned) — phytanoyl-CoA dioxygenase family protein Rv3633 plsB2 (requalified) — glycerol-3-phosphate 1-O-acyltransferase plsB2 Rv0210 (family_assigned) — hypothetical protein Rv0210 Rv0249c (family_assigned) — succinate dehydrogenase membrane anchor subunit Rv0249c Rv0248c (family_assigned) — fumarate reductase/succinate dehydrogenase flavopr Rv0248c sdhC (family_assigned) — succinate dehydrogenase%2C cytochrome b556 subunit sdhC sdhD (family_assigned) — succinate dehydrogenase hydrophobic membrane ancho sdhD

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.