MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3677c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3677c (requalified) — MBL fold metallo-hydrolase Rv3677c Rv3678c (family_assigned) — RidA family protein Rv3678c Rv3678A (family_assigned) — hypothetical protein Rv3678A Rv3680 (family_assigned) — ArsA family ATPase Rv3680 Rv3679 (family_assigned) — ArsA family ATPase Rv3679 vapC11 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC11 Rv3040c (requalified) — NUDIX hydrolase Rv3040c Rv0331 (requalified) — FAD/NAD(P)-binding oxidoreductase Rv0331 nusB (requalified) — transcription antitermination factor NusB nusB Rv1637c (family_assigned) — hypothetical protein Rv1637c Rv2260 (requalified) — MBL fold metallo-hydrolase Rv2260 Rv2367c (requalified) — endoribonuclease Rv2367c truA (requalified) — tRNA pseudouridine synthase A truA fusA1 (requalified) — elongation factor G fusA1 fusA2 (family_assigned) — elongation factor G-like protein EF-G2 fusA2 Rv1211 (family_assigned) — hypothetical protein Rv1211 lsr2 (requalified) — histone-like nucleoid-structuring protein Lsr2 lsr2 Rv0487 (family_assigned) — YbjN domain-containing protein Rv0487 Rv0502 (family_assigned) — lysophospholipid acyltransferase family protein Rv0502 TB16.3 (family_assigned) — SRPBCC family protein TB16.3 vapB11 (requalified) — antitoxin VapB11 vapB11 vapB15 (requalified) — antitoxin VapB15 vapB15 Rv2531c (requalified) — amino acid decarboxylase Rv2531c ilvA (requalified) — threonine ammonia-lyase ilvA vapC30 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC30 echA17 (requalified) — enoyl-CoA hydratase echA17 Rv3041c (family_assigned) — ABC transporter ATP-binding protein Rv3041c Rv3038c (family_assigned) — methyltransferase domain-containing protein Rv3038c serB2 (requalified) — phosphoserine phosphatase SerB serB2 ctaD (family_assigned) — cytochrome c oxidase subunit I ctaD TB22.2 (family_assigned) — RsiV family protein TB22.2 sirA (requalified) — sulfite reductase sirA metZ (requalified) — O-succinylhomoserine sulfhydrylase metZ metB (requalified) — cystathionine gamma-synthase metB Rv3684 (requalified) — lyase Rv3684 cysK1 (requalified) — O-acetylserine sulfhydrylase cysK1 aao (requalified) — FAD-dependent oxidoreductase aao Rv2532c (requalified) — antitermination protein NusB Rv2532c efp (requalified) — elongation factor P efp pepQ (family_assigned) — Xaa-Pro peptidase family protein pepQ rpsJ (requalified) — 30S ribosomal protein S10 rpsJ nusA (requalified) — transcription termination factor NusA nusA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ uvrA (family_assigned) — excinuclease ABC subunit UvrA uvrA Rv0360c (family_assigned) — hypothetical protein Rv0360c Rv1457c (family_assigned) — ABC transporter permease Rv1457c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.