MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3676 · 46 genes shown · anchor marP · open gene page → · ← back to 1 hop

Evidence: Min score 0
crp (family_assigned) — cAMP-activated global transcriptional regulator CR crp marP (requalified) — acid resistance serine protease MarP marP Rv2239c (family_assigned) — hypothetical protein Rv2239c Rv3645 (family_assigned) — adenylate/guanylate cyclase domain-containing prot Rv3645 Rv1339 (family_assigned) — hypothetical protein Rv1339 Rv2212 (requalified) — adenylyl cyclase Rv2212 cya (requalified) — adenylate cyclase cya Rv2435c (family_assigned) — adenylate/guanylate cyclase domain-containing prot Rv2435c Rv3675 (dark) — hypothetical protein Rv3675 nth (requalified) — endonuclease III nth Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c Rv1358 (family_assigned) — LuxR C-terminal-related transcriptional regulator Rv1358 Rv0386 (family_assigned) — LuxR family transcriptional regulator Rv0386 Rv3672c (requalified) — CoA pyrophosphatase Rv3672c mpa (requalified) — proteasome ATPase mpa Rv0175 (family_assigned) — hypothetical protein Rv0175 glpK (requalified) — glycerol kinase GlpK glpK mec (requalified) — CysO-cysteine peptidase mec ahpE (requalified) — peroxiredoxin AhpE ahpE Rv2240c (family_assigned) — hypothetical protein Rv2240c Rv2699c (dark) — DUF4193 domain-containing protein Rv2699c frr (requalified) — ribosome recycling factor frr Rv1626 (family_assigned) — ANTAR domain-containing response regulator Rv1626 rpsA (requalified) — 30S ribosomal protein S1 rpsA cpdA (requalified) — 3'%2C5'-cyclic adenosine monophosphate phosphodies cpdA ndkA (requalified) — nucleoside-diphosphate kinase ndkA pykA (requalified) — pyruvate kinase pykA relA (family_assigned) — RelA/SpoT family protein relA ribA2 (requalified) — bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphat ribA2 ribA1 (requalified) — riboflavin biosynthesis protein RibA ribA1 rphA (requalified) — ribonuclease PH rphA cysM (requalified) — O-phosphoserine sulfhydrylase cysM cysO (requalified) — sulfur carrier protein CysO cysO rdgB (family_assigned) — RdgB/HAM1 family non-canonical purine NTP pyrophos rdgB Rv1333 (family_assigned) — P1 family peptidase Rv1333 pepB (requalified) — leucyl aminopeptidase pepB gcvT (requalified) — aminomethyltransferase gcvT ilvE (requalified) — branched-chain amino acid aminotransferase ilvE Rv1320c (family_assigned) — adenylate/guanylate cyclase domain-containing prot Rv1320c Rv1624c (family_assigned) — HdeD family acid-resistance protein Rv1624c Rv2434c (requalified) — mechanosensitive ion channel Rv2434c Rv2432c (dark) — hypothetical protein Rv2432c nrtS (requalified) — nitrate/nitrite transporter NrtS nrtS Rv1354c (requalified) — bifunctional diguanylate cyclase/phosphodiesterase Rv1354c Rv0998 (family_assigned) — GNAT family N-acetyltransferase Rv0998 cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.