MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3662c · 46 genes shown · anchor dppD · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3662c (requalified) — oxidoreductase Rv3662c dppD (family_assigned) — ABC transporter ATP-binding protein dppD dppC (family_assigned) — dipeptide ABC transporter permease DppC dppC dppB (family_assigned) — ABC transporter permease dppB dppA (family_assigned) — ABC transporter substrate-binding protein dppA Rv0487 (family_assigned) — YbjN domain-containing protein Rv0487 adnA (requalified) — ATP-dependent DNA helicase AdnA adnA Rv0877 (dark) — DUF3027 domain-containing protein Rv0877 Rv3256c (requalified) — TobH protein Rv3256c Rv1417 (family_assigned) — PH domain-containing protein Rv1417 Rv3679 (family_assigned) — ArsA family ATPase Rv3679 Rv0822c (family_assigned) — LCP family protein Rv0822c Rv2170 (requalified) — N-acetyltransferase Rv2170 oppC (family_assigned) — ABC transporter permease oppC oppB (family_assigned) — ABC transporter permease oppB oppA (family_assigned) — oligopeptide ABC transporter substrate-binding pro oppA oppD (family_assigned) — ABC transporter ATP-binding protein oppD mshA (requalified) — D-inositol-3-phosphate glycosyltransferase mshA fadE5 (requalified) — acyl-CoA dehydrogenase fadE5 fadE15 (requalified) — acyl-CoA dehydrogenase fadE15 TB16.3 (family_assigned) — SRPBCC family protein TB16.3 adnB (requalified) — ATP-dependent DNA helicase AdnB adnB uvrD2 (requalified) — ATP-dependent DNA helicase UvrD2 uvrD2 Rv2191 (family_assigned) — hypothetical protein Rv2191 nudC (requalified) — NAD(+) diphosphatase nudC radA (requalified) — DNA repair protein RadA radA Rv3200c (family_assigned) — potassium channel family protein Rv3200c Rv0875c (dark) — DUF2771 domain-containing protein Rv0875c Rv0876c (requalified) — MFS transporter Rv0876c Rv2699c (dark) — DUF4193 domain-containing protein Rv2699c Rv2239c (family_assigned) — hypothetical protein Rv2239c manA (requalified) — mannose-6-phosphate isomerase%2C class I manA pmmA (requalified) — phosphomannomutase/phosphoglucomutase pmmA cei (requalified) — envelope integrity protein Cei cei Rv2732c (family_assigned) — hypothetical protein Rv2732c Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv0358 (requalified) — peptidase M50 Rv0358 ribA2 (requalified) — bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphat ribA2 ribH (requalified) — 6%2C7-dimethyl-8-ribityllumazine synthase ribH lprH (family_assigned) — hypothetical protein lprH mihF (requalified) — integration host factor MihF mihF rpsS (requalified) — 30S ribosomal protein S19 rpsS rpsL (requalified) — 30S ribosomal protein S12 rpsL Rv3680 (family_assigned) — ArsA family ATPase Rv3680 Rv3678A (family_assigned) — hypothetical protein Rv3678A Rv3678c (family_assigned) — RidA family protein Rv3678c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.