MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3660c · 40 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
ssd (requalified) — septum site-determining protein Ssd ssd Rv3659c (requalified) — conjugal transfer protein Rv3659c Rv3657c (family_assigned) — membrane protein Rv3657c Rv3658c (family_assigned) — type II secretion system F family protein Rv3658c Rv3656c (dark) — DUF4244 domain-containing protein Rv3656c Rv0990c (family_assigned) — SAF domain-containing protein Rv0990c Rv3654c (family_assigned) — hypothetical protein Rv3654c Rv2862c (family_assigned) — DUF1707 domain-containing protein Rv2862c bpa (requalified) — proteasome activator protein Bpa bpa Rv3655c (requalified) — apoptosis inhibitor Rv3655c Rv3118 (family_assigned) — hypothetical protein Rv3118 Rv0814c (family_assigned) — DUF1416 domain-containing protein Rv0814c sigF (requalified) — RNA polymerase sigma factor SigF sigF Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c Rv0991c (family_assigned) — FmdB family zinc ribbon protein Rv0991c mapB (requalified) — methionine aminopeptidase mapB Rv0320 (family_assigned) — hypothetical protein Rv0320 Rv2712c (dark) — DUF4192 domain-containing protein Rv2712c Rv1728c (requalified) — glycoside hydrolase Rv1728c ponA2 (requalified) — bifunctional penicillin-insensitive transglycosyla ponA2 vapC23 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC23 prcA (family_assigned) — proteasome subunit alpha prcA mpa (requalified) — proteasome ATPase mpa prcB (family_assigned) — proteasome subunit beta prcB rfbE (family_assigned) — ABC transporter ATP-binding protein rfbE glfT1 (requalified) — galactofuranosyl transferase GlfT glfT1 rfbD (family_assigned) — ABC transporter permease rfbD cysA3 (requalified) — thiosulfate sulfurtransferase cysA3 cysA2 (requalified) — sulfurtransferase cysA2 Rv2844 (family_assigned) — ferritin-like domain-containing protein Rv2844 moaE1 (family_assigned) — molybdopterin synthase catalytic subunit 1 moaE1 Rv3120 (requalified) — class I SAM-dependent methyltransferase Rv3120 Rv2468c (requalified) — hypothetical protein Rv2468c Rv2365c (requalified) — cytidine deaminase Rv2365c Rv1332 (family_assigned) — transcriptional regulator Rv1332 rsbW (requalified) — anti-sigma B factor RsbW rsbW rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC usfY (family_assigned) — hypothetical protein usfY rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.