MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3657c · 39 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3657c (family_assigned) — membrane protein Rv3657c Rv3659c (requalified) — conjugal transfer protein Rv3659c Rv3658c (family_assigned) — type II secretion system F family protein Rv3658c Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c ssd (requalified) — septum site-determining protein Ssd ssd Rv3655c (requalified) — apoptosis inhibitor Rv3655c Rv3656c (dark) — DUF4244 domain-containing protein Rv3656c Rv3654c (family_assigned) — hypothetical protein Rv3654c Rv0990c (family_assigned) — SAF domain-containing protein Rv0990c eccB4 (family_assigned) — type VII secretion system ESX-4 subunit EccB4 eccB4 Rv3231c (family_assigned) — hypothetical protein Rv3231c Rv2170 (requalified) — N-acetyltransferase Rv2170 Rv1354c (requalified) — bifunctional diguanylate cyclase/phosphodiesterase Rv1354c fbiC (requalified) — bifunctional FO biosynthesis protein CofGH fbiC rsfA (requalified) — anti-sigma-F factor antagonist RsfA rsfA rsfB (family_assigned) — STAS domain-containing protein rsfB Rv1904 (requalified) — anti-sigma factor antagonist Rv1904 Rv2638 (requalified) — anti-sigma factor antagonist Rv2638 Rv0991c (family_assigned) — FmdB family zinc ribbon protein Rv0991c eccD4 (family_assigned) — type VII secretion system ESX-4 subunit EccD4 eccD4 eccC4 (family_assigned) — type VII secretion system ESX-4 FtsK/SpoIIIE famil eccC4 mycP2 (requalified) — type VII secretion system ESX-2 serine protease my mycP2 cut3 (family_assigned) — cutinase family protein cut3 mycP5 (requalified) — type VII secretion system ESX-5 serine protease my mycP5 ppk2 (requalified) — polyphosphate kinase ppk2 Rv3230c (requalified) — NADPH oxidoreductase Rv3230c Rv3233c (family_assigned) — Possible triacylglycerol synthase (diacylglycerol Rv3233c tgs3 (requalified) — diacyglycerol O-acyltransferase tgs3 Rv0948c (requalified) — chorismate mutase Rv0948c Rv2169c (dark) — DUF3040 domain-containing protein Rv2169c lppM (requalified) — lipoprotein LppM lppM Rv3311 (family_assigned) — primosomal protein Rv3311 Rv2520c (dark) — DUF3618 domain-containing protein Rv2520c Rv3212 (family_assigned) — hypothetical protein Rv3212 moeY (family_assigned) — Rv1355c family protein moeY Rv1353c (family_assigned) — TetR/AcrR family transcriptional regulator C-termi Rv1353c Rv1356c (requalified) — hypothetical protein Rv1356c Rv1358 (family_assigned) — LuxR C-terminal-related transcriptional regulator Rv1358 Rv1357c (requalified) — cyclic diguanylate phosphodiesterase Rv1357c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.