MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3656c · 41 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3656c (dark) — DUF4244 domain-containing protein Rv3656c Rv3655c (requalified) — apoptosis inhibitor Rv3655c Rv3657c (family_assigned) — membrane protein Rv3657c Rv3659c (requalified) — conjugal transfer protein Rv3659c Rv3658c (family_assigned) — type II secretion system F family protein Rv3658c Rv3654c (family_assigned) — hypothetical protein Rv3654c ssd (requalified) — septum site-determining protein Ssd ssd Rv0948c (requalified) — chorismate mutase Rv0948c Rv3605c (family_assigned) — DUF3180 domain-containing protein Rv3605c embC (requalified) — arabinosyltransferase EmbC embC Rv2179c (requalified) — polyadenylate-specific 3'-exoribonuclease AS Rv2179c 35kd_ag (family_assigned) — hypothetical protein 35kd_ag embB (requalified) — arabinosyltransferase EmbB embB Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c Rv0990c (family_assigned) — SAF domain-containing protein Rv0990c aroG (requalified) — 3-deoxy-7-phosphoheptulonate synthase class II aroG aroF (requalified) — chorismate synthase aroF tyrA (requalified) — prephenate dehydrogenase TyrA tyrA pheA (requalified) — prephenate dehydratase pheA trpE (requalified) — anthranilate synthase component I trpE Rv1885c (requalified) — chorismate mutase Rv1885c folE (requalified) — GTP cyclohydrolase I FolE folE folK (requalified) — 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine folK folP1 (requalified) — dihydropteroate synthase folP1 folB (requalified) — dihydroneopterin aldolase folB ftsH (requalified) — ATP-dependent zinc metalloprotease FtsH ftsH Rv3604c (dark) — DUF6779 domain-containing protein Rv3604c acpM (requalified) — meromycolate extension acyl carrier protein AcpM acpM aftA (requalified) — galactan 5-O-arabinofuranosyltransferase aftA Rv3789 (requalified) — arabinogalactan biosynthesis protein Rv3789 dprE1 (requalified) — decaprenylphospho-beta-D-ribofuranose 2-dehydrogen dprE1 dprE2 (requalified) — decaprenylphosphoryl-D-2-keto erythropentose reduc dprE2 embA (requalified) — arabinosyltransferase EmbA embA Rv2180c (family_assigned) — integral membrane protein Rv2180c Rv2181 (requalified) — alpha-(1-2)-phosphatidylinositol mannoside mannosy Rv2181 Rv2468c (requalified) — hypothetical protein Rv2468c clgR (family_assigned) — transcriptional regulator ClgR clgR Rv2743c (family_assigned) — hypothetical protein Rv2743c htpX (requalified) — zinc metalloprotease HtpX htpX sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB aftC (requalified) — arabinofuranan 3-O-arabinosyltransferase aftC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.