MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3623 · 46 genes shown · anchor pheT · open gene page → · ← back to 1 hop

Evidence: Min score 0
lpqG (family_assigned) — SIMPL domain-containing protein lpqG pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT rimJ (requalified) — ribosomal-protein-alanine acetyltransferase RimJ rimJ tsaE (family_assigned) — tRNA (adenosine(37)-N6)-threonylcarbamoyltransfera tsaE esxV (requalified) — ESAT-6 like protein EsxV esxV Rv3629c (family_assigned) — DUF475 domain-containing protein Rv3629c lspA (requalified) — signal peptidase II lspA proX (family_assigned) — glycine betaine/carnitine/choline/L-proline ABC tr proX lprE (family_assigned) — LppP/LprE family lipoprotein lprE Rv2585c (family_assigned) — ABC transporter substrate-binding protein Rv2585c lppD (requalified) — lipoprotein LppD lppD gltB (family_assigned) — glutamate synthase large subunit gltB glnH (family_assigned) — glutamate ABC transporter substrate-binding protei glnH pheS (family_assigned) — phenylalanine--tRNA ligase subunit alpha pheS leuS (requalified) — leucine--tRNA ligase leuS ileS (requalified) — isoleucine--tRNA ligase ileS rpsB (requalified) — 30S ribosomal protein S2 rpsB rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rplO (requalified) — 50S ribosomal protein L15 rplO moeA1 (requalified) — molybdopterin molybdenumtransferase 1 moeA1 galU (requalified) — UTP--glucose-1-phosphate uridylyltransferase galU Rv0996 (family_assigned) — hypothetical protein Rv0996 Rv0992c (requalified) — 5-formyltetrahydrofolate cyclo-ligase Rv0992c Rv0991c (family_assigned) — FmdB family zinc ribbon protein Rv0991c rnc (requalified) — ribonuclease III rnc tsaB (family_assigned) — tRNA (adenosine(37)-N6)-threonylcarbamoyltransfera tsaB alr (requalified) — alanine racemase alr gcp (family_assigned) — tRNA (adenosine(37)-N6)-threonylcarbamoyltransfera gcp rimI (requalified) — ribosomal protein S18-alanine N-acetyltransferase rimI Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c gadB (requalified) — glutamate decarboxylase gadB esxW (requalified) — type VII secretion system protein EsxW esxW esxO (requalified) — type VII secretion system effector EsxO esxO esxL (requalified) — type VII secretion system ESX-5 protein EsxL esxL esxN (requalified) — ESAT-6 like protein EsxN esxN esxP (requalified) — type VII secretion system ESX-5 protein EsxJ esxP esxK (requalified) — type VII secretion system ESX-5 protein EsxJ esxK Rv3630 (family_assigned) — hypothetical protein Rv3630 Rv3631 (family_assigned) — glycosyltransferase family 2 protein Rv3631 Rv3632 (family_assigned) — DUF2304 domain-containing protein Rv3632 Rv0180c (family_assigned) — YhgE/Pip domain-containing protein Rv0180c desA1 (requalified) — acyl-ACP desaturase DesA desA1 Rv3718c (family_assigned) — SRPBCC family protein Rv3718c Rv1540 (requalified) — RNA pseudouridine synthase Rv1540 ansA (requalified) — asparaginase ansA rbfA (requalified) — 30S ribosome-binding factor RbfA rbfA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.