MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3602c · 44 genes shown · anchor panD · open gene page → · ← back to 1 hop

Evidence: Min score 0
panC (requalified) — pantoate--beta-alanine ligase panC panD (requalified) — aspartate 1-decarboxylase panD Rv3600c (requalified) — type III pantothenate kinase Rv3600c panB (requalified) — 3-methyl-2-oxobutanoate hydroxymethyltransferase panB Rv3603c (family_assigned) — Rossmann-like and DUF2520 domain-containing protei Rv3603c gadB (requalified) — glutamate decarboxylase gadB Rv2573 (requalified) — 2-dehydropantoate 2-reductase Rv2573 cmk (requalified) — (d)CMP kinase cmk pcd (requalified) — piperideine-6-carboxylic acid dehydrogenase pcd coaA (requalified) — pantothenate kinase coaA gabT (requalified) — 4-aminobutyrate--2-oxoglutarate transaminase gabT Rv0223c (requalified) — aldehyde dehydrogenase Rv0223c Rv0147 (requalified) — aldehyde dehydrogenase Rv0147 aldA (requalified) — aldehyde dehydrogenase aldA dfp (requalified) — bifunctional phosphopantothenoylcysteine decarboxy dfp kdtB (requalified) — pantetheine-phosphate adenylyltransferase kdtB ilvE (requalified) — branched-chain amino acid aminotransferase ilvE ilvD (requalified) — dihydroxy-acid dehydratase ilvD Rv2226 (family_assigned) — CYTH and CHAD domain-containing protein Rv2226 lysS (requalified) — lysine--tRNA ligase lysS Rv3604c (dark) — DUF6779 domain-containing protein Rv3604c lsr2 (requalified) — histone-like nucleoid-structuring protein Lsr2 lsr2 rocA (requalified) — L-glutamate gamma-semialdehyde dehydrogenase rocA Rv2575 (requalified) — neutral zinc metallopeptidase Rv2575 aspS (requalified) — aspartate--tRNA ligase aspS Rv2574 (family_assigned) — SRPBCC family protein Rv2574 Rv1000c (family_assigned) — hypothetical protein Rv1000c engA (requalified) — ribosome biogenesis GTPase Der engA Rv1711 (requalified) — pseudouridine synthase Rv1711 scpB (family_assigned) — SMC-Scp complex subunit ScpB scpB scpA (requalified) — segregation/condensation protein A scpA rpsA (requalified) — 30S ribosomal protein S1 rpsA aroA (requalified) — 3-phosphoshikimate 1-carboxyvinyltransferase aroA Rv3292 (family_assigned) — VOC family protein Rv3292 acs (requalified) — acetate--CoA ligase acs ackA (requalified) — acetate kinase ackA fadB (requalified) — fatty oxidation protein FadB fadB adhE1 (family_assigned) — zinc-type alcohol dehydrogenase subunit E adhE1 Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c glyA1 (requalified) — serine hydroxymethyltransferase glyA1 gabD1 (requalified) — succinate-semialdehyde dehydrogenase gabD1 mmsA (requalified) — CoA-acylating methylmalonate-semialdehyde dehydrog mmsA gabD2 (requalified) — succinic semialdehyde dehydrogenase gabD2 adhB (requalified) — alcohol dehydrogenase B adhB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.