MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3592 · 46 genes shown · anchor lpqF · open gene page → · ← back to 1 hop

Evidence: Min score 0
mhuD (requalified) — mycobilin-forming heme oxygenase MhuD mhuD lpqF (requalified) — serine hydrolase lpqF Rv3591c (family_assigned) — alpha/beta hydrolase Rv3591c hycE (family_assigned) — NADH-quinone oxidoreductase subunit C hycE Rv3594 (requalified) — N-acetylmuramoyl-L-alanine amidase Rv3594 Rv0959 (family_assigned) — VWA domain-containing protein Rv0959 PE_PGRS58 (family_assigned) — PE-PGRS family protein PE_PGRS58 PE_PGRS58 mmpL3 (requalified) — trehalose monomycolate RND transporter MmpL3 mmpL3 Rv0265c (family_assigned) — iron ABC transporter substrate-binding lipoprotein Rv0265c hemN (requalified) — oxygen-independent coproporphyrinogen III oxidase hemN mmpL11 (requalified) — RND transporter MmpL11 mmpL11 ideR (family_assigned) — iron-dependent transcriptional regulator IdeR ideR irtA (family_assigned) — iron ABC transporter ATP-binding protein/permease irtA pirG (requalified) — exported repetitive protein pirG Rv3707c (requalified) — hypothetical protein Rv3707c Rv2743c (family_assigned) — hypothetical protein Rv2743c eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 lipV (requalified) — lipase LipV lipV octT (requalified) — diglucosylglycerate octanoyltransferase octT Rv3415c (family_assigned) — hypothetical protein Rv3415c Rv0083 (requalified) — oxidoreductase Rv0083 Rv0082 (family_assigned) — NADH-quinone oxidoreductase subunit B family prote Rv0082 hycQ (requalified) — hydrogenase HycQ hycQ hycD (family_assigned) — respiratory chain complex I subunit 1 family prote hycD nuoI (family_assigned) — NADH-quinone oxidoreductase subunit NuoI nuoI hycP (family_assigned) — hypothetical protein hycP Rv1230c (family_assigned) — lytic transglycosylase domain-containing protein Rv1230c Rv1443c (family_assigned) — hypothetical protein Rv1443c espK (family_assigned) — ESX-1 secretion-associated protein EspK espK eccD1 (family_assigned) — type VII secretion system ESX-1 subunit EccD1 eccD1 Rv1288 (requalified) — esterase Rv1288 lppF (requalified) — haloacid dehalogenase-like hydrolase lppF Rv0958 (family_assigned) — ATP-binding protein Rv0958 purH (requalified) — bifunctional phosphoribosylaminoimidazolecarboxami purH purN (requalified) — phosphoribosylglycinamide formyltransferase purN Rv0955 (family_assigned) — DUF6350 family protein Rv0955 Rv0954 (requalified) — DUF5336 domain-containing protein Rv0954 vapC9 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC9 zmp1 (requalified) — zinc metalloprotease Zmp1 zmp1 Rv1987 (family_assigned) — cellulose-binding protein Rv1987 PPE40 (family_assigned) — PPE family protein PPE40 PPE40 Rv0207c (family_assigned) — NYN domain-containing protein Rv0207c trmB (requalified) — tRNA (guanosine(46)-N7)-methyltransferase TrmB trmB Rv0210 (family_assigned) — hypothetical protein Rv0210 Rv3909 (dark) — hypothetical protein Rv3909 Rv3835 (family_assigned) — septum formation family protein Rv3835

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.