MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3578 · 46 genes shown · anchor lppH · open gene page → · ← back to 1 hop

Evidence: Min score 0
arsB2 (requalified) — arsenic transport integral membrane protein ArsB arsB2 Rv3577 (requalified) — hypothetical protein Rv3577 lppH (requalified) — lipoprotein LppH lppH Rv1885c (requalified) — chorismate mutase Rv1885c Rv3575c (family_assigned) — LacI family DNA-binding transcriptional regulator Rv3575c Rv2655c (family_assigned) — DUF3631 domain-containing protein Rv2655c rpsF (requalified) — 30S ribosomal protein S6 rpsF Rv0067c (family_assigned) — helix-turn-helix domain-containing protein Rv0067c Rv1226c (family_assigned) — PH domain-containing protein Rv1226c arsC (family_assigned) — ACR3 family arsenite efflux transporter arsC oppC (family_assigned) — ABC transporter permease oppC Rv1874 (family_assigned) — hypothetical protein Rv1874 Rv0138 (family_assigned) — nuclear transport factor 2 family protein Rv0138 Rv2015c (requalified) — HNH endonuclease signature motif containing protei Rv2015c Rv2060 (family_assigned) — integral membrane protein Rv2060 Rv2059 (family_assigned) — hypothetical protein Rv2059 Rv1747 (family_assigned) — ATP-binding cassette domain-containing protein Rv1747 aroF (requalified) — chorismate synthase aroF fbpB (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpB tyrA (requalified) — prephenate dehydrogenase TyrA tyrA pheA (requalified) — prephenate dehydratase pheA trpE (requalified) — anthranilate synthase component I trpE Rv0948c (requalified) — chorismate mutase Rv0948c gltB (family_assigned) — glutamate synthase large subunit gltB guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA xylB (requalified) — FGGY-family carbohydrate kinase xylB pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT bglS (requalified) — beta-glucosidase BglS bglS Rv2656c (dark) — DUF2742 domain-containing protein Rv2656c Rv2659c (requalified) — tyrosine-type recombinase/integrase Rv2659c Rv2657c (family_assigned) — helix-turn-helix domain-containing protein Rv2657c Rv2654c (requalified) — type II toxin-antitoxin system antitoxin Rv2654c Rv2658c (family_assigned) — hypothetical protein Rv2658c Rv2653c (requalified) — type II toxin-antitoxin system toxin Rv2653c rpsD (requalified) — 30S ribosomal protein S4 rpsD rplW (requalified) — 50S ribosomal protein L23 rplW rpsB (requalified) — 30S ribosomal protein S2 rpsB rpsG (requalified) — 30S ribosomal protein S7 rpsG rplS (requalified) — 50S ribosomal protein L19 rplS rpsR1 (requalified) — 30S ribosomal protein S18 rpsR1 Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c Rv3055 (family_assigned) — helix-turn-helix domain-containing protein Rv3055 Rv3183 (family_assigned) — XRE family transcriptional regulator Rv3183 Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c iniR (family_assigned) — isoniazid response ATPase/transcriptional regulato iniR Rv1931c (family_assigned) — transcriptional regulator Rv1931c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.