MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3576 · 46 genes shown · anchor arsB2 · open gene page → · ← back to 1 hop

Evidence: Min score 0
lppH (requalified) — lipoprotein LppH lppH Rv3577 (requalified) — hypothetical protein Rv3577 arsB2 (requalified) — arsenic transport integral membrane protein ArsB arsB2 Rv3575c (family_assigned) — LacI family DNA-binding transcriptional regulator Rv3575c Rv2060 (family_assigned) — integral membrane protein Rv2060 Rv2059 (family_assigned) — hypothetical protein Rv2059 Rv1747 (family_assigned) — ATP-binding cassette domain-containing protein Rv1747 mmpL9 (requalified) — RND transporter MmpL9 mmpL9 lppK (family_assigned) — hypothetical protein lppK proX (family_assigned) — glycine betaine/carnitine/choline/L-proline ABC tr proX lpqQ (family_assigned) — sensor domain-containing protein lpqQ lprB (family_assigned) — DUF3558 domain-containing protein lprB lprC (family_assigned) — DUF3558 domain-containing protein lprC Rv1874 (family_assigned) — hypothetical protein Rv1874 Rv0138 (family_assigned) — nuclear transport factor 2 family protein Rv0138 Rv2015c (requalified) — HNH endonuclease signature motif containing protei Rv2015c Rv1885c (requalified) — chorismate mutase Rv1885c Rv2655c (family_assigned) — DUF3631 domain-containing protein Rv2655c rpsF (requalified) — 30S ribosomal protein S6 rpsF gltB (family_assigned) — glutamate synthase large subunit gltB guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA xylB (requalified) — FGGY-family carbohydrate kinase xylB pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT bglS (requalified) — beta-glucosidase BglS bglS mntH (requalified) — divalent metal cation transporter MntH mntH zur (requalified) — zinc uptake transcriptional repressor Zur zur drrB (family_assigned) — daunorubicin ABC transporter permease DrrB drrB rpmB2 (requalified) — 50S ribosomal protein L28 rpmB2 rpsN2 (requalified) — 30S ribosomal protein S14 rpsN2 Rv0106 (family_assigned) — GTP-binding protein Rv0106 PPE3 (family_assigned) — PPE family protein PPE3 PPE3 rpmG1 (requalified) — 50S ribosomal protein L33 rpmG1 Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c pknB (family_assigned) — Stk1 family PASTA domain-containing Ser/Thr kinase pknB pknF (requalified) — serine/threonine protein kinase PknF pknF Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c Rv1278 (family_assigned) — AAA family ATPase Rv1278 Rv1277 (family_assigned) — hypothetical protein Rv1277 Rv1598c (family_assigned) — nitroreductase family deazaflavin-dependent oxidor Rv1598c Rv1303 (family_assigned) — ATP synthase subunit I Rv1303 eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 lppX (requalified) — LppX_LprAFG lipoprotein lppX Rv0128 (family_assigned) — YoaK family protein Rv0128 eccB3 (family_assigned) — type VII secretion system ESX-3 subunit EccB3 eccB3 polA (requalified) — DNA polymerase I polA Rv2090 (requalified) — 5'-3' exonuclease Rv2090

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.