MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3575c · 46 genes shown · anchor xylB · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3575c (family_assigned) — LacI family DNA-binding transcriptional regulator Rv3575c gltB (family_assigned) — glutamate synthase large subunit gltB guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA xylB (requalified) — FGGY-family carbohydrate kinase xylB Rv3577 (requalified) — hypothetical protein Rv3577 pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT bglS (requalified) — beta-glucosidase BglS bglS lppH (requalified) — lipoprotein LppH lppH Rv2059 (family_assigned) — hypothetical protein Rv2059 Rv2060 (family_assigned) — integral membrane protein Rv2060 ribA2 (requalified) — bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphat ribA2 ribA1 (requalified) — riboflavin biosynthesis protein RibA ribA1 galK (requalified) — galactokinase galK gltD (family_assigned) — glutamate synthase subunit beta gltD fprA (requalified) — ferredoxin--NADP(+) reductase FprA fprA fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH fprB (requalified) — FAD-dependent oxidoreductase fprB carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB glnA1 (requalified) — type I glutamate--ammonia ligase glnA1 guaB2 (requalified) — IMP dehydrogenase guaB2 guaB1 (family_assigned) — GuaB1 family IMP dehydrogenase-related protein guaB1 guaB3 (family_assigned) — GuaB3 family IMP dehydrogenase-related protein guaB3 apt (requalified) — adenine phosphoribosyltransferase apt argS (requalified) — arginine--tRNA ligase argS rplK (requalified) — 50S ribosomal protein L11 rplK rpe (requalified) — ribulose-phosphate 3-epimerase rpe fucA (requalified) — L-fuculose-phosphate aldolase fucA serA2 (requalified) — D-3-phosphoglycerate dehydrogenase SerA serA2 Rv0730 (requalified) — GCN5-like N-acetyltransferase Rv0730 Rv1006 (family_assigned) — hypothetical protein Rv1006 arsB2 (requalified) — arsenic transport integral membrane protein ArsB arsB2 Rv1874 (family_assigned) — hypothetical protein Rv1874 Rv0138 (family_assigned) — nuclear transport factor 2 family protein Rv0138 Rv2015c (requalified) — HNH endonuclease signature motif containing protei Rv2015c pheS (family_assigned) — phenylalanine--tRNA ligase subunit alpha pheS leuS (requalified) — leucine--tRNA ligase leuS ileS (requalified) — isoleucine--tRNA ligase ileS rpsB (requalified) — 30S ribosomal protein S2 rpsB rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rplO (requalified) — 50S ribosomal protein L15 rplO aglA (family_assigned) — glycoside hydrolase family 13 protein aglA Rv0185 (family_assigned) — TIGR04338 family metallohydrolase Rv0185 celA1 (requalified) — cellulase CelA celA1 celA2b (family_assigned) — Probable cellulase CelA2b (endo-1,4-beta-glucanase celA2b celA2a (family_assigned) — Probable cellulase CelA2a (endo-1,4-beta-glucanase celA2a Rv0184 (dark) — DUF2786 domain-containing protein Rv0184

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.