MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3574 · 41 genes shown · anchor fadE34 · open gene page → · ← back to 1 hop

Evidence: Min score 0
kstR (family_assigned) — cholesterol catabolism transcriptional regulator K kstR fadE34 (requalified) — acyl-CoA dehydrogenase fadE34 chsH1 (family_assigned) — 3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-Co chsH1 chsH2 (family_assigned) — 3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-Co chsH2 Rv3521 (family_assigned) — hypothetical protein Rv3521 ltp4 (family_assigned) — thiolase domain-containing protein ltp4 Rv3552 (family_assigned) — CoA-transferase subunit beta Rv3552 Rv3551 (family_assigned) — CoA transferase subunit A Rv3551 Rv3527 (family_assigned) — hypothetical protein Rv3527 kshA (family_assigned) — 3-ketosteroid-9-alpha-hydroxylase subunit KshA kshA fadD19 (requalified) — acyl-CoA synthetase fadD19 hsaA (family_assigned) — flavin-dependent monooxygenase oxygenase subunit H hsaA Rv3531c (family_assigned) — hypothetical protein Rv3531c fadB (requalified) — fatty oxidation protein FadB fadB ltp2 (requalified) — lipid-transfer protein ltp2 ltp3 (family_assigned) — thiolase domain-containing protein ltp3 fadE29 (requalified) — acyl-CoA dehydrogenase FadE29 fadE29 fadE28 (requalified) — acyl-CoA dehydrogenase FadE28 fadE28 cyp125 (requalified) — steroid C26-monooxygenase cyp125 fadA5 (requalified) — steroid 3-ketoacyl-CoA thiolase fadA5 Rv3520c (requalified) — coenzyme F420-dependent oxidoreductase Rv3520c Rv0940c (family_assigned) — TIGR03619 family F420-dependent LLM class oxidored Rv0940c echA20 (family_assigned) — enoyl-CoA hydratase family protein echA20 Rv3549c (family_assigned) — SDR family oxidoreductase Rv3549c Rv3553 (requalified) — nitronate monooxygenase Rv3553 Rv3548c (family_assigned) — SDR family oxidoreductase Rv3548c Rv3559c (family_assigned) — SDR family oxidoreductase Rv3559c fadE30 (family_assigned) — acyl-CoA dehydrogenase family protein fadE30 Rv3525c (family_assigned) — gamma carbonic anhydrase family protein Rv3525c hsaC (requalified) — iron-dependent extradiol dioxygenase HsaC hsaC Rv2743c (family_assigned) — hypothetical protein Rv2743c kstD (requalified) — 3-oxosteroid 1-dehydrogenase kstD kshB (family_assigned) — 3-ketosteroid-9-alpha-hydroxylase reductase subuni kshB fadE26 (requalified) — acyl-CoA dehydrogenase fadE26 echA19 (family_assigned) — crotonase/enoyl-CoA hydratase family protein echA19 fadD1 (requalified) — fatty-acid--CoA ligase FadD1 fadD1 hsaD (requalified) — alpha/beta fold hydrolase hsaD hsaB (family_assigned) — flavin-dependent monooxygenase reductase subunit H hsaB Rv3529c (requalified) — TLR2-mediated response inhibitor Rv3529c Rv3530c (family_assigned) — SDR family oxidoreductase Rv3530c Rv0310c (family_assigned) — nuclear transport factor 2 family protein Rv0310c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.