MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3569c · 40 genes shown · anchor hsaC · open gene page → · ← back to 1 hop

Evidence: Min score 0
hsaD (requalified) — alpha/beta fold hydrolase hsaD hsaC (requalified) — iron-dependent extradiol dioxygenase HsaC hsaC hsaA (family_assigned) — flavin-dependent monooxygenase oxygenase subunit H hsaA hsaB (family_assigned) — flavin-dependent monooxygenase reductase subunit H hsaB fadD3 (requalified) — 3-((3aS%2C4S%2C7aS)-7a-methyl-1%2C5-dioxo-octahydr fadD3 kshB (family_assigned) — 3-ketosteroid-9-alpha-hydroxylase reductase subuni kshB Rv3572 (family_assigned) — hypothetical protein Rv3572 kshA (family_assigned) — 3-ketosteroid-9-alpha-hydroxylase subunit KshA kshA hsaE (requalified) — 2-keto-4-pentenoate hydratase hsaE hsaF (requalified) — 4-hydroxy-2-oxovalerate aldolase hsaF hsaG (requalified) — acetaldehyde dehydrogenase (acetylating) hsaG kstD (requalified) — 3-oxosteroid 1-dehydrogenase kstD pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 Rv1817 (family_assigned) — FAD-binding protein Rv1817 chsH1 (family_assigned) — 3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-Co chsH1 echA20 (family_assigned) — enoyl-CoA hydratase family protein echA20 Rv3566A (dark) — hypothetical protein Rv3566A fadE31 (family_assigned) — acyl-CoA dehydrogenase family protein fadE31 Rv3559c (family_assigned) — SDR family oxidoreductase Rv3559c fadE32 (family_assigned) — acyl-CoA dehydrogenase family protein fadE32 fadE33 (family_assigned) — acyl-CoA dehydrogenase family protein fadE33 aspB (requalified) — pyridoxal phosphate-dependent aminotransferase aspB fadE30 (family_assigned) — acyl-CoA dehydrogenase family protein fadE30 Rv1465 (family_assigned) — SUF system NifU family Fe-S cluster assembly prote Rv1465 Rv3527 (family_assigned) — hypothetical protein Rv3527 Rv3531c (family_assigned) — hypothetical protein Rv3531c mhpE (requalified) — 4-hydroxy-2-oxovalerate aldolase mhpE Rv3538 (requalified) — dehydrogenase Rv3538 leuB (requalified) — 3-isopropylmalate dehydrogenase leuB leuA (requalified) — 2-isopropylmalate synthase leuA fadA5 (requalified) — steroid 3-ketoacyl-CoA thiolase fadA5 aldA (requalified) — aldehyde dehydrogenase aldA sdhC (family_assigned) — succinate dehydrogenase%2C cytochrome b556 subunit sdhC Rv0760c (family_assigned) — ketosteroid isomerase family protein Rv0760c fas (requalified) — fatty acid synthase fas fabD (requalified) — malonyl CoA-acyl carrier protein transacylase fabD mbtB (requalified) — phenyloxazoline synthase MbtB mbtB pks12 (requalified) — type I polyketide synthase pks12 ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC papA1 (requalified) — acyltransferase PapA1 papA1

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.