MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3565 · 46 genes shown · anchor fadE33 · open gene page → · ← back to 1 hop

Evidence: Min score 0
aspB (requalified) — pyridoxal phosphate-dependent aminotransferase aspB fadE33 (family_assigned) — acyl-CoA dehydrogenase family protein fadE33 fadE32 (family_assigned) — acyl-CoA dehydrogenase family protein fadE32 fadD3 (requalified) — 3-((3aS%2C4S%2C7aS)-7a-methyl-1%2C5-dioxo-octahydr fadD3 fadE31 (family_assigned) — acyl-CoA dehydrogenase family protein fadE31 Rv3559c (family_assigned) — SDR family oxidoreductase Rv3559c pheA (requalified) — prephenate dehydratase pheA ask (requalified) — aspartate kinase ask fadE30 (family_assigned) — acyl-CoA dehydrogenase family protein fadE30 Rv0393 (family_assigned) — hypothetical protein Rv0393 lysA (requalified) — diaminopimelate decarboxylase lysA serB2 (requalified) — phosphoserine phosphatase SerB serB2 gltB (family_assigned) — glutamate synthase large subunit gltB Rv3551 (family_assigned) — CoA transferase subunit A Rv3551 fas (requalified) — fatty acid synthase fas fabD (requalified) — malonyl CoA-acyl carrier protein transacylase fabD tyrA (requalified) — prephenate dehydrogenase TyrA tyrA Rv0948c (requalified) — chorismate mutase Rv0948c Rv1885c (requalified) — chorismate mutase Rv1885c cobC (requalified) — aminotransferase cobC hisC2 (requalified) — histidinol-phosphate transaminase hisC2 hisC1 (requalified) — histidinol-phosphate aminotransferase hisC1 asd (requalified) — aspartate-semialdehyde dehydrogenase asd thrA (requalified) — homoserine dehydrogenase thrA asnB (requalified) — asparagine synthase (glutamine-hydrolyzing) asnB purA (requalified) — adenylosuccinate synthase purA argG (requalified) — argininosuccinate synthase argG nadB (requalified) — L-aspartate oxidase nadB echA20 (family_assigned) — enoyl-CoA hydratase family protein echA20 Rv1765c (family_assigned) — hypothetical protein Rv1765c Rv1587c (family_assigned) — hypothetical protein Rv1587c Rv2015c (requalified) — HNH endonuclease signature motif containing protei Rv2015c Rv0094c (family_assigned) — hypothetical protein Rv0094c Rv3467 (family_assigned) — hypothetical protein Rv3467 Rv1148c (family_assigned) — hypothetical protein Rv1148c dapF (requalified) — diaminopimelate epimerase dapF murE (requalified) — UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-d murE argS (requalified) — arginine--tRNA ligase argS thrC (requalified) — threonine synthase thrC dapB (requalified) — 4-hydroxy-tetrahydrodipicolinate reductase dapB serC (requalified) — phosphoserine transaminase serC trpB (family_assigned) — tryptophan synthase subunit beta trpB glyA1 (requalified) — serine hydroxymethyltransferase glyA1 glyA2 (requalified) — serine hydroxymethyltransferase glyA2 cbs (requalified) — cystathionine beta-synthase cbs trpA (family_assigned) — tryptophan synthase subunit alpha trpA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.