MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3563 · 40 genes shown · anchor fadE31 · open gene page → · ← back to 1 hop

Evidence: Min score 0
fadE32 (family_assigned) — acyl-CoA dehydrogenase family protein fadE32 fadE31 (family_assigned) — acyl-CoA dehydrogenase family protein fadE31 fadE30 (family_assigned) — acyl-CoA dehydrogenase family protein fadE30 fadE33 (family_assigned) — acyl-CoA dehydrogenase family protein fadE33 aspB (requalified) — pyridoxal phosphate-dependent aminotransferase aspB fadD3 (requalified) — 3-((3aS%2C4S%2C7aS)-7a-methyl-1%2C5-dioxo-octahydr fadD3 Rv3559c (family_assigned) — SDR family oxidoreductase Rv3559c fadA6 (requalified) — acetyl-CoA C-acetyltransferase fadA6 Rv3553 (requalified) — nitronate monooxygenase Rv3553 echA20 (family_assigned) — enoyl-CoA hydratase family protein echA20 chsH1 (family_assigned) — 3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-Co chsH1 fadB (requalified) — fatty oxidation protein FadB fadB fadE17 (requalified) — acyl-CoA dehydrogenase fadE17 Rv3551 (family_assigned) — CoA transferase subunit A Rv3551 pheA (requalified) — prephenate dehydratase pheA fas (requalified) — fatty acid synthase fas fabD (requalified) — malonyl CoA-acyl carrier protein transacylase fabD fadB2 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB2 fadB2 fadB3 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB fadB3 acs (requalified) — acetate--CoA ligase acs scoB (family_assigned) — succinyl-CoA--3-ketoacid CoA transferase subunit B scoB glcB (requalified) — malate synthase G glcB Rv3552 (family_assigned) — CoA-transferase subunit beta Rv3552 Rv3549c (family_assigned) — SDR family oxidoreductase Rv3549c Rv3548c (family_assigned) — SDR family oxidoreductase Rv3548c chsH2 (family_assigned) — 3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-Co chsH2 ltp2 (requalified) — lipid-transfer protein ltp2 fadE29 (requalified) — acyl-CoA dehydrogenase FadE29 fadE29 fadE28 (requalified) — acyl-CoA dehydrogenase FadE28 fadE28 cyp125 (requalified) — steroid C26-monooxygenase cyp125 fadA5 (requalified) — steroid 3-ketoacyl-CoA thiolase fadA5 fadA (requalified) — acetyl-CoA C-acetyltransferase fadA fadA2 (requalified) — acetyl-CoA C-acetyltransferase fadA2 fadA4 (requalified) — acetyl-CoA acetyltransferase fadA4 Rv1867 (requalified) — acetyl-CoA acetyltransferase Rv1867 ltp3 (family_assigned) — thiolase domain-containing protein ltp3 echA13 (requalified) — enoyl-CoA hydratase echA13 fadE18 (family_assigned) — acyl-CoA dehydrogenase family protein fadE18 mce3A (family_assigned) — Mce family protein Mce3A mce3A yrbE3B (family_assigned) — ABC transporter permease yrbE3B

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.