MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3560c · 29 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
fadE30 (family_assigned) — acyl-CoA dehydrogenase family protein fadE30 Rv3559c (family_assigned) — SDR family oxidoreductase Rv3559c fadE32 (family_assigned) — acyl-CoA dehydrogenase family protein fadE32 fadE33 (family_assigned) — acyl-CoA dehydrogenase family protein fadE33 fadE31 (family_assigned) — acyl-CoA dehydrogenase family protein fadE31 echA20 (family_assigned) — enoyl-CoA hydratase family protein echA20 Rv3551 (family_assigned) — CoA transferase subunit A Rv3551 fadD3 (requalified) — 3-((3aS%2C4S%2C7aS)-7a-methyl-1%2C5-dioxo-octahydr fadD3 Rv3552 (family_assigned) — CoA-transferase subunit beta Rv3552 fadE18 (family_assigned) — acyl-CoA dehydrogenase family protein fadE18 ltp2 (requalified) — lipid-transfer protein ltp2 chsH1 (family_assigned) — 3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-Co chsH1 Rv3553 (requalified) — nitronate monooxygenase Rv3553 fas (requalified) — fatty acid synthase fas fabD (requalified) — malonyl CoA-acyl carrier protein transacylase fabD aspB (requalified) — pyridoxal phosphate-dependent aminotransferase aspB Rv3549c (family_assigned) — SDR family oxidoreductase Rv3549c Rv3548c (family_assigned) — SDR family oxidoreductase Rv3548c fadE17 (requalified) — acyl-CoA dehydrogenase fadE17 echA13 (requalified) — enoyl-CoA hydratase echA13 fixB (family_assigned) — electron transfer flavoprotein subunit alpha/FixB fixB fixA (family_assigned) — electron transfer flavoprotein subunit beta/FixA f fixA chsH2 (family_assigned) — 3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-Co chsH2 fadE29 (requalified) — acyl-CoA dehydrogenase FadE29 fadE29 fadB (requalified) — fatty oxidation protein FadB fadB fadE28 (requalified) — acyl-CoA dehydrogenase FadE28 fadE28 Rv3521 (family_assigned) — hypothetical protein Rv3521 cyp125 (requalified) — steroid C26-monooxygenase cyp125 fadA5 (requalified) — steroid 3-ketoacyl-CoA thiolase fadA5

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.