MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3552 · 33 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3552 (family_assigned) — CoA-transferase subunit beta Rv3552 Rv3551 (family_assigned) — CoA transferase subunit A Rv3551 echA20 (family_assigned) — enoyl-CoA hydratase family protein echA20 Rv3549c (family_assigned) — SDR family oxidoreductase Rv3549c Rv3553 (requalified) — nitronate monooxygenase Rv3553 Rv3548c (family_assigned) — SDR family oxidoreductase Rv3548c Rv3559c (family_assigned) — SDR family oxidoreductase Rv3559c fadE30 (family_assigned) — acyl-CoA dehydrogenase family protein fadE30 scoA (family_assigned) — succinyl-CoA--3-ketoacid CoA transferase subunit A scoA fadA6 (requalified) — acetyl-CoA C-acetyltransferase fadA6 fadE31 (family_assigned) — acyl-CoA dehydrogenase family protein fadE31 fadD3 (requalified) — 3-((3aS%2C4S%2C7aS)-7a-methyl-1%2C5-dioxo-octahydr fadD3 ltp4 (family_assigned) — thiolase domain-containing protein ltp4 fas (requalified) — fatty acid synthase fas Rv3538 (requalified) — dehydrogenase Rv3538 htdY (requalified) — 3-hydroxyacyl-thioester dehydratase HtdY htdY fadE33 (family_assigned) — acyl-CoA dehydrogenase family protein fadE33 fabD (requalified) — malonyl CoA-acyl carrier protein transacylase fabD fadE32 (family_assigned) — acyl-CoA dehydrogenase family protein fadE32 scoB (family_assigned) — succinyl-CoA--3-ketoacid CoA transferase subunit B scoB accA1 (family_assigned) — acetyl/propionyl/methylcrotonyl-CoA carboxylase su accA1 fadB (requalified) — fatty oxidation protein FadB fadB accD1 (family_assigned) — acetyl-/propionyl-CoA carboxylase subunit beta accD1 fadA4 (requalified) — acetyl-CoA acetyltransferase fadA4 fadB2 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB2 fadB2 fadB3 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB fadB3 acs (requalified) — acetate--CoA ligase acs glcB (requalified) — malate synthase G glcB aspB (requalified) — pyridoxal phosphate-dependent aminotransferase aspB Rv3521 (family_assigned) — hypothetical protein Rv3521 chsH2 (family_assigned) — 3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-Co chsH2 ltp3 (family_assigned) — thiolase domain-containing protein ltp3 chsH1 (family_assigned) — 3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-Co chsH1

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.