MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3550 · 30 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
echA20 (family_assigned) — enoyl-CoA hydratase family protein echA20 Rv3551 (family_assigned) — CoA transferase subunit A Rv3551 Rv3552 (family_assigned) — CoA-transferase subunit beta Rv3552 Rv3549c (family_assigned) — SDR family oxidoreductase Rv3549c Rv3553 (requalified) — nitronate monooxygenase Rv3553 Rv3548c (family_assigned) — SDR family oxidoreductase Rv3548c fadE30 (family_assigned) — acyl-CoA dehydrogenase family protein fadE30 ltp4 (family_assigned) — thiolase domain-containing protein ltp4 Rv3559c (family_assigned) — SDR family oxidoreductase Rv3559c fadE31 (family_assigned) — acyl-CoA dehydrogenase family protein fadE31 fadD3 (requalified) — 3-((3aS%2C4S%2C7aS)-7a-methyl-1%2C5-dioxo-octahydr fadD3 ltp3 (family_assigned) — thiolase domain-containing protein ltp3 ltp2 (requalified) — lipid-transfer protein ltp2 fas (requalified) — fatty acid synthase fas Rv3538 (requalified) — dehydrogenase Rv3538 htdY (requalified) — 3-hydroxyacyl-thioester dehydratase HtdY htdY fadE32 (family_assigned) — acyl-CoA dehydrogenase family protein fadE32 fadE33 (family_assigned) — acyl-CoA dehydrogenase family protein fadE33 Rv3521 (family_assigned) — hypothetical protein Rv3521 fadB (requalified) — fatty oxidation protein FadB fadB chsH2 (family_assigned) — 3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-Co chsH2 chsH1 (family_assigned) — 3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-Co chsH1 fabD (requalified) — malonyl CoA-acyl carrier protein transacylase fabD aspB (requalified) — pyridoxal phosphate-dependent aminotransferase aspB fadB3 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB fadB3 fadB2 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB2 fadB2 acs (requalified) — acetate--CoA ligase acs Rv0914c (requalified) — acetyl-CoA acetyltransferase Rv0914c fadE29 (requalified) — acyl-CoA dehydrogenase FadE29 fadE29 fadE28 (requalified) — acyl-CoA dehydrogenase FadE28 fadE28

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.