MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3549c · 42 genes shown · anchor echA20 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3549c (family_assigned) — SDR family oxidoreductase Rv3549c echA20 (family_assigned) — enoyl-CoA hydratase family protein echA20 Rv3548c (family_assigned) — SDR family oxidoreductase Rv3548c Rv3552 (family_assigned) — CoA-transferase subunit beta Rv3552 Rv3551 (family_assigned) — CoA transferase subunit A Rv3551 Rv3553 (requalified) — nitronate monooxygenase Rv3553 fas (requalified) — fatty acid synthase fas fadD3 (requalified) — 3-((3aS%2C4S%2C7aS)-7a-methyl-1%2C5-dioxo-octahydr fadD3 Rv3502c (requalified) — 3-oxoacyl-ACP reductase Rv3502c ephD (family_assigned) — SDR family oxidoreductase ephD Rv1245c (family_assigned) — SDR family NAD(P)-dependent oxidoreductase Rv1245c Rv3085 (family_assigned) — SDR family NAD(P)-dependent oxidoreductase Rv3085 fadE30 (family_assigned) — acyl-CoA dehydrogenase family protein fadE30 Rv3538 (requalified) — dehydrogenase Rv3538 htdY (requalified) — 3-hydroxyacyl-thioester dehydratase HtdY htdY Rv3559c (family_assigned) — SDR family oxidoreductase Rv3559c pks7 (requalified) — type I polyketide synthase pks7 pks17 (requalified) — polyketide synthase pks17 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 mas (requalified) — mycocerosate synthase mas accD3 (family_assigned) — carboxyl transferase domain-containing protein accD3 pks6 (requalified) — membrane bound polyketide synthase pks6 fadE31 (family_assigned) — acyl-CoA dehydrogenase family protein fadE31 fadE32 (family_assigned) — acyl-CoA dehydrogenase family protein fadE32 fadE33 (family_assigned) — acyl-CoA dehydrogenase family protein fadE33 aspB (requalified) — pyridoxal phosphate-dependent aminotransferase aspB fadE26 (requalified) — acyl-CoA dehydrogenase fadE26 fadE27 (family_assigned) — acyl-CoA dehydrogenase family protein fadE27 pks12 (requalified) — type I polyketide synthase pks12 ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c Rv1249c (family_assigned) — hypothetical protein Rv1249c relE (requalified) — type II toxin-antitoxin system mRNA interferase Re relE relB (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant relB Rv1714 (family_assigned) — SDR family oxidoreductase Rv1714 Rv3083 (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv3083 lipR (family_assigned) — alpha/beta hydrolase lipR adhD (requalified) — NDMA-dependent alcohol dehydrogenase adhD tgs4 (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr tgs4 fadD13 (requalified) — long-chain-fatty-acid--CoA ligase FadD13 fadD13 Rv3087 (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr Rv3087

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.