MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3548c · 38 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3548c (family_assigned) — SDR family oxidoreductase Rv3548c Rv3549c (family_assigned) — SDR family oxidoreductase Rv3549c echA20 (family_assigned) — enoyl-CoA hydratase family protein echA20 Rv3538 (requalified) — dehydrogenase Rv3538 htdY (requalified) — 3-hydroxyacyl-thioester dehydratase HtdY htdY Rv3552 (family_assigned) — CoA-transferase subunit beta Rv3552 Rv3551 (family_assigned) — CoA transferase subunit A Rv3551 Rv3553 (requalified) — nitronate monooxygenase Rv3553 fas (requalified) — fatty acid synthase fas fadE30 (family_assigned) — acyl-CoA dehydrogenase family protein fadE30 fadE31 (family_assigned) — acyl-CoA dehydrogenase family protein fadE31 Rv3485c (requalified) — short-chain type dehydrogenase/reductase Rv3485c fadE34 (requalified) — acyl-CoA dehydrogenase fadE34 kstD (requalified) — 3-oxosteroid 1-dehydrogenase kstD Rv0148 (family_assigned) — SDR family oxidoreductase Rv0148 Rv3502c (requalified) — 3-oxoacyl-ACP reductase Rv3502c fabG2 (requalified) — 3-oxoacyl-ACP reductase FabG fabG2 fabG4 (requalified) — 3-oxoacyl-ACP reductase fabG4 Rv0769 (family_assigned) — SDR family oxidoreductase Rv0769 Rv3559c (family_assigned) — SDR family oxidoreductase Rv3559c pks7 (requalified) — type I polyketide synthase pks7 pks17 (requalified) — polyketide synthase pks17 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 mas (requalified) — mycocerosate synthase mas accD3 (family_assigned) — carboxyl transferase domain-containing protein accD3 pks6 (requalified) — membrane bound polyketide synthase pks6 fadE32 (family_assigned) — acyl-CoA dehydrogenase family protein fadE32 fadE33 (family_assigned) — acyl-CoA dehydrogenase family protein fadE33 fadD3 (requalified) — 3-((3aS%2C4S%2C7aS)-7a-methyl-1%2C5-dioxo-octahydr fadD3 Rv2129c (family_assigned) — SDR family oxidoreductase Rv2129c Rv0547c (family_assigned) — SDR family oxidoreductase Rv0547c Rv1882c (family_assigned) — SDR family oxidoreductase Rv1882c chsH1 (family_assigned) — 3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-Co chsH1 kstR (family_assigned) — cholesterol catabolism transcriptional regulator K kstR ltp4 (family_assigned) — thiolase domain-containing protein ltp4 fadB (requalified) — fatty oxidation protein FadB fadB ltp2 (requalified) — lipid-transfer protein ltp2 ltp3 (family_assigned) — thiolase domain-containing protein ltp3

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.