MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3536c · 46 genes shown · anchor hsaF · open gene page → · ← back to 1 hop

Evidence: Min score 0
hsaE (requalified) — 2-keto-4-pentenoate hydratase hsaE hsaF (requalified) — 4-hydroxy-2-oxovalerate aldolase hsaF hsaG (requalified) — acetaldehyde dehydrogenase (acetylating) hsaG mhpE (requalified) — 4-hydroxy-2-oxovalerate aldolase mhpE kstD (requalified) — 3-oxosteroid 1-dehydrogenase kstD hsaD (requalified) — alpha/beta fold hydrolase hsaD Rv3538 (requalified) — dehydrogenase Rv3538 PPE62 (family_assigned) — PPE family protein PPE62 PPE62 hsaC (requalified) — iron-dependent extradiol dioxygenase HsaC hsaC kshB (family_assigned) — 3-ketosteroid-9-alpha-hydroxylase reductase subuni kshB Rv1937 (requalified) — FAD-binding oxidoreductase Rv1937 hsaA (family_assigned) — flavin-dependent monooxygenase oxygenase subunit H hsaA kshA (family_assigned) — 3-ketosteroid-9-alpha-hydroxylase subunit KshA kshA leuB (requalified) — 3-isopropylmalate dehydrogenase leuB leuA (requalified) — 2-isopropylmalate synthase leuA fadA5 (requalified) — steroid 3-ketoacyl-CoA thiolase fadA5 aldA (requalified) — aldehyde dehydrogenase aldA ilvB2 (family_assigned) — thiamine pyrophosphate-binding protein ilvB2 Rv3468c (requalified) — dTDP-glucose 4,6-dehydratase Rv3468c sdhC (family_assigned) — succinate dehydrogenase%2C cytochrome b556 subunit sdhC Rv0760c (family_assigned) — ketosteroid isomerase family protein Rv0760c Rv1817 (family_assigned) — FAD-binding protein Rv1817 hsaB (family_assigned) — flavin-dependent monooxygenase reductase subunit H hsaB fadD3 (requalified) — 3-((3aS%2C4S%2C7aS)-7a-methyl-1%2C5-dioxo-octahydr fadD3 Rv3572 (family_assigned) — hypothetical protein Rv3572 Rv3548c (family_assigned) — SDR family oxidoreductase Rv3548c Rv0148 (family_assigned) — SDR family oxidoreductase Rv0148 Rv3502c (requalified) — 3-oxoacyl-ACP reductase Rv3502c fabG2 (requalified) — 3-oxoacyl-ACP reductase FabG fabG2 fabG4 (requalified) — 3-oxoacyl-ACP reductase fabG4 PPE5 (family_assigned) — PPE family protein PPE5 PPE5 PPE21 (family_assigned) — PPE family protein PPE21 PPE21 PPE6 (family_assigned) — PPE family protein PPE6 PPE6 PE_PGRS48 (family_assigned) — PE-PGRS family protein PE_PGRS48 PE_PGRS48 PE_PGRS23 (family_assigned) — PE-PGRS family protein PE_PGRS23 PE_PGRS23 PE_PGRS2 (family_assigned) — PE-PGRS family protein PE_PGRS2 PE_PGRS2 Rv1465 (family_assigned) — SUF system NifU family Fe-S cluster assembly prote Rv1465 fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH fprB (requalified) — FAD-dependent oxidoreductase fprB fprA (requalified) — ferredoxin--NADP(+) reductase FprA fprA gltD (family_assigned) — glutamate synthase subunit beta gltD ephB (requalified) — epoxide hydrolase EphB ephB ribA1 (requalified) — riboflavin biosynthesis protein RibA ribA1 chsH1 (family_assigned) — 3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-Co chsH1 echA20 (family_assigned) — enoyl-CoA hydratase family protein echA20 Rv3527 (family_assigned) — hypothetical protein Rv3527

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.