MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3530c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3530c (family_assigned) — SDR family oxidoreductase Rv3530c Rv3529c (requalified) — TLR2-mediated response inhibitor Rv3529c Rv3531c (family_assigned) — hypothetical protein Rv3531c fas (requalified) — fatty acid synthase fas Rv3502c (requalified) — 3-oxoacyl-ACP reductase Rv3502c Rv1865c (family_assigned) — SDR family oxidoreductase Rv1865c Rv0945 (requalified) — oxidoreductase Rv0945 hsaA (family_assigned) — flavin-dependent monooxygenase oxygenase subunit H hsaA Rv1882c (family_assigned) — SDR family oxidoreductase Rv1882c cmrA (requalified) — mycolate reductase cmrA Rv1937 (requalified) — FAD-binding oxidoreductase Rv1937 Rv0310c (family_assigned) — nuclear transport factor 2 family protein Rv0310c chsH1 (family_assigned) — 3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-Co chsH1 htpG (requalified) — molecular chaperone HtpG htpG alaS (requalified) — alanine--tRNA ligase alaS rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA mftF (requalified) — mycofactocin biosynthesis glycosyltransferase MftF mftF kshA (family_assigned) — 3-ketosteroid-9-alpha-hydroxylase subunit KshA kshA chsH2 (family_assigned) — 3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-Co chsH2 pks7 (requalified) — type I polyketide synthase pks7 pks17 (requalified) — polyketide synthase pks17 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 mas (requalified) — mycocerosate synthase mas accD3 (family_assigned) — carboxyl transferase domain-containing protein accD3 pks6 (requalified) — membrane bound polyketide synthase pks6 Rv3538 (requalified) — dehydrogenase Rv3538 htdY (requalified) — 3-hydroxyacyl-thioester dehydratase HtdY htdY fadE26 (requalified) — acyl-CoA dehydrogenase fadE26 fadE27 (family_assigned) — acyl-CoA dehydrogenase family protein fadE27 Rv3549c (family_assigned) — SDR family oxidoreductase Rv3549c Rv1864c (family_assigned) — hypothetical protein Rv1864c Rv0927c (family_assigned) — SDR family oxidoreductase Rv0927c Rv1863c (family_assigned) — integral membrane protein Rv1863c Rv1714 (family_assigned) — SDR family oxidoreductase Rv1714 Rv0944 (requalified) — formamidopyrimidine-DNA glycosylase Rv0944 Rv3485c (requalified) — short-chain type dehydrogenase/reductase Rv3485c Rv0943c (dark) — hypothetical protein Rv0943c Rv0769 (family_assigned) — SDR family oxidoreductase Rv0769 hsaC (requalified) — iron-dependent extradiol dioxygenase HsaC hsaC hsaD (requalified) — alpha/beta fold hydrolase hsaD hsaB (family_assigned) — flavin-dependent monooxygenase reductase subunit H hsaB kshB (family_assigned) — 3-ketosteroid-9-alpha-hydroxylase reductase subuni kshB echA20 (family_assigned) — enoyl-CoA hydratase family protein echA20 Rv1883c (family_assigned) — SRPBCC family protein Rv1883c cyp140 (requalified) — cytochrome P450 cyp140 lppE (requalified) — lipoprotein LpqH lppE

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.