MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3525c · 46 genes shown · anchor kshA · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3525c (family_assigned) — gamma carbonic anhydrase family protein Rv3525c Rv3527 (family_assigned) — hypothetical protein Rv3527 kshA (family_assigned) — 3-ketosteroid-9-alpha-hydroxylase subunit KshA kshA Rv3273 (requalified) — transmembrane carbonic anhydrase Rv3273 canB (requalified) — beta-carbonic anhydrase CanB canB canA (requalified) — beta-carbonic anhydrase CanA canA rfe (requalified) — UDP-N-acetylglucosamine--decaprenyl-phosphate N-ac rfe pyrC (requalified) — dihydroorotase pyrC Rv0106 (family_assigned) — GTP-binding protein Rv0106 acs (requalified) — acetate--CoA ligase acs murX (requalified) — phospho-N-acetylmuramoyl-pentapeptide-transferase murX pepQ (family_assigned) — Xaa-Pro peptidase family protein pepQ mmpS5 (requalified) — siderophore transporter accessory protein MmpS5 mmpS5 chsH2 (family_assigned) — 3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-Co chsH2 hsaC (requalified) — iron-dependent extradiol dioxygenase HsaC hsaC Rv2743c (family_assigned) — hypothetical protein Rv2743c Rv3521 (family_assigned) — hypothetical protein Rv3521 kstD (requalified) — 3-oxosteroid 1-dehydrogenase kstD kshB (family_assigned) — 3-ketosteroid-9-alpha-hydroxylase reductase subuni kshB Rv3531c (family_assigned) — hypothetical protein Rv3531c hsaA (family_assigned) — flavin-dependent monooxygenase oxygenase subunit H hsaA pks12 (requalified) — type I polyketide synthase pks12 Rv3272 (requalified) — CoA transferase Rv3272 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 mas (requalified) — mycocerosate synthase mas mutY (requalified) — A/G-specific adenine glycosylase mutY Rv3587c (family_assigned) — hypothetical protein Rv3587c apt (requalified) — adenine phosphoribosyltransferase apt Rv1707 (family_assigned) — SulP family inorganic anion transporter Rv1707 oppC (family_assigned) — ABC transporter permease oppC oppA (family_assigned) — oligopeptide ABC transporter substrate-binding pro oppA oppB (family_assigned) — ABC transporter permease oppB cysC (requalified) — adenylyl-sulfate kinase cysC wbbL1 (requalified) — N-acetylglucosaminyl-diphospho-decaprenol L-rhamno wbbL1 Rv1301 (requalified) — L-threonylcarbamoyladenylate synthase Rv1301 atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH hemK (requalified) — peptide chain release factor N(5)-glutamine methyl hemK prfA (requalified) — peptide chain release factor 1 prfA rpmE (requalified) — 50S ribosomal protein L31 rpmE pyrB (family_assigned) — aspartate carbamoyltransferase catalytic subunit pyrB carA (family_assigned) — glutamine-hydrolyzing carbamoyl-phosphate synthase carA carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB pyrR (family_assigned) — bifunctional pyr operon transcriptional regulator/ pyrR Rv1382 (requalified) — transporter Rv1382 pyrD (requalified) — quinone-dependent dihydroorotate dehydrogenase pyrD rpsN2 (requalified) — 30S ribosomal protein S14 rpsN2

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.