MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3522 · 41 genes shown · anchor ltp3 · open gene page → · ← back to 1 hop

Evidence: Min score 0
ltp4 (family_assigned) — thiolase domain-containing protein ltp4 Rv3521 (family_assigned) — hypothetical protein Rv3521 fadB (requalified) — fatty oxidation protein FadB fadB chsH2 (family_assigned) — 3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-Co chsH2 ltp3 (family_assigned) — thiolase domain-containing protein ltp3 echA20 (family_assigned) — enoyl-CoA hydratase family protein echA20 chsH1 (family_assigned) — 3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-Co chsH1 fadE26 (requalified) — acyl-CoA dehydrogenase fadE26 echA19 (family_assigned) — crotonase/enoyl-CoA hydratase family protein echA19 fadE29 (requalified) — acyl-CoA dehydrogenase FadE29 fadE29 fadE34 (requalified) — acyl-CoA dehydrogenase fadE34 Rv3552 (family_assigned) — CoA-transferase subunit beta Rv3552 Rv3520c (requalified) — coenzyme F420-dependent oxidoreductase Rv3520c ltp2 (requalified) — lipid-transfer protein ltp2 Rv0940c (family_assigned) — TIGR03619 family F420-dependent LLM class oxidored Rv0940c fadA (requalified) — acetyl-CoA C-acetyltransferase fadA fadA2 (requalified) — acetyl-CoA C-acetyltransferase fadA2 fadA4 (requalified) — acetyl-CoA acetyltransferase fadA4 fadA6 (requalified) — acetyl-CoA C-acetyltransferase fadA6 Rv1867 (requalified) — acetyl-CoA acetyltransferase Rv1867 fadE28 (requalified) — acyl-CoA dehydrogenase FadE28 fadE28 fadA5 (requalified) — steroid 3-ketoacyl-CoA thiolase fadA5 fadB3 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB fadB3 fadB2 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB2 fadB2 acs (requalified) — acetate--CoA ligase acs Rv0914c (requalified) — acetyl-CoA acetyltransferase Rv0914c Rv3551 (family_assigned) — CoA transferase subunit A Rv3551 Rv3549c (family_assigned) — SDR family oxidoreductase Rv3549c Rv3553 (requalified) — nitronate monooxygenase Rv3553 Rv3548c (family_assigned) — SDR family oxidoreductase Rv3548c fadE30 (family_assigned) — acyl-CoA dehydrogenase family protein fadE30 cyp125 (requalified) — steroid C26-monooxygenase cyp125 fadE27 (family_assigned) — acyl-CoA dehydrogenase family protein fadE27 Rv3502c (requalified) — 3-oxoacyl-ACP reductase Rv3502c fadD17 (requalified) — long-chain-fatty-acid--CoA ligase FadD17 fadD17 fadE1 (requalified) — acyl-CoA dehydrogenase FadE1 fadE1 fadE13 (family_assigned) — acyl-CoA dehydrogenase family protein fadE13 kstR (family_assigned) — cholesterol catabolism transcriptional regulator K kstR Rv3559c (family_assigned) — SDR family oxidoreductase Rv3559c fbiB (requalified) — coenzyme F420-0:L-glutamate ligase fbiB ddn (requalified) — deazaflavin-dependent nitroreductase Ddn ddn

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.