MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3515c · 46 genes shown · anchor fadE26 · open gene page → · ← back to 1 hop

Evidence: Min score 0
fadD19 (requalified) — acyl-CoA synthetase fadD19 fadE26 (requalified) — acyl-CoA dehydrogenase fadE26 cyp125 (requalified) — steroid C26-monooxygenase cyp125 echA19 (family_assigned) — crotonase/enoyl-CoA hydratase family protein echA19 ltp4 (family_assigned) — thiolase domain-containing protein ltp4 fadD1 (requalified) — fatty-acid--CoA ligase FadD1 fadD1 Rv3521 (family_assigned) — hypothetical protein Rv3521 chsH1 (family_assigned) — 3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-Co chsH1 chsH2 (family_assigned) — 3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-Co chsH2 rplF (requalified) — 50S ribosomal protein L6 rplF pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC mas (requalified) — mycocerosate synthase mas fadE27 (family_assigned) — acyl-CoA dehydrogenase family protein fadE27 Rv3502c (requalified) — 3-oxoacyl-ACP reductase Rv3502c fadD17 (requalified) — long-chain-fatty-acid--CoA ligase FadD17 fadD17 pks13 (requalified) — polyketide synthase Pks13 pks13 fadE28 (requalified) — acyl-CoA dehydrogenase FadE28 fadE28 cyp142 (requalified) — steroid C26-monooxygenase Cyp142 cyp142 Rv1106c (requalified) — 3 beta-hydroxysteroid dehydrogenase/delta 5-->4-is Rv1106c fadE29 (requalified) — acyl-CoA dehydrogenase FadE29 fadE29 fadB2 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB2 fadB2 Rv1867 (requalified) — acetyl-CoA acetyltransferase Rv1867 fadB3 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB fadB3 fadE1 (requalified) — acyl-CoA dehydrogenase FadE1 fadE1 fadE13 (family_assigned) — acyl-CoA dehydrogenase family protein fadE13 fadB (requalified) — fatty oxidation protein FadB fadB ltp3 (family_assigned) — thiolase domain-containing protein ltp3 echA20 (family_assigned) — enoyl-CoA hydratase family protein echA20 fadD18 (requalified) — fatty-acid--CoA ligase FadD18 fadD18 pks12 (requalified) — type I polyketide synthase pks12 ltp2 (requalified) — lipid-transfer protein ltp2 Rv3520c (requalified) — coenzyme F420-dependent oxidoreductase Rv3520c Rv0940c (family_assigned) — TIGR03619 family F420-dependent LLM class oxidored Rv0940c fadA5 (requalified) — steroid 3-ketoacyl-CoA thiolase fadA5 rpsD (requalified) — 30S ribosomal protein S4 rpsD rplW (requalified) — 50S ribosomal protein L23 rplW rpsG (requalified) — 30S ribosomal protein S7 rpsG rplS (requalified) — 50S ribosomal protein L19 rplS rpsR1 (requalified) — 30S ribosomal protein S18 rpsR1 rplB (requalified) — 50S ribosomal protein L2 rplB fas (requalified) — fatty acid synthase fas fabD (requalified) — malonyl CoA-acyl carrier protein transacylase fabD mbtB (requalified) — phenyloxazoline synthase MbtB mbtB ppsE (requalified) — phthiocerol type I polyketide synthase PpsE ppsE ppsD (requalified) — phthiocerol type I polyketide synthase PpsD ppsD

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.