MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3511 · 42 genes shown · anchor PE_PGRS56 · open gene page → · ← back to 1 hop

Evidence: Min score 0
PE_PGRS55 (family_assigned) — PE-PGRS family protein PE_PGRS55 PE_PGRS55 PE_PGRS56 (family_assigned) — PE-PGRS family protein PE_PGRS56 PE_PGRS56 zmp1 (requalified) — zinc metalloprotease Zmp1 zmp1 aspB (requalified) — pyridoxal phosphate-dependent aminotransferase aspB Rv3538 (requalified) — dehydrogenase Rv3538 PE10 (family_assigned) — PE family protein PE10 PE10 Rv3551 (family_assigned) — CoA transferase subunit A Rv3551 PE_PGRS37 (family_assigned) — PE-PGRS family protein PE_PGRS37 PE_PGRS37 PE_PGRS60 (family_assigned) — PE-PGRS family-related protein PE_PGRS60 PE_PGRS60 PE_PGRS49 (family_assigned) — PE-PGRS family protein PE_PGRS49 PE_PGRS49 omamA (requalified) — hypothetical protein omamA omamB (requalified) — hypothetical protein omamB polA (requalified) — DNA polymerase I polA ruvB (requalified) — Holliday junction branch migration DNA helicase Ru ruvB Rv3633 (family_assigned) — phytanoyl-CoA dioxygenase family protein Rv3633 Rv1501 (family_assigned) — phytanoyl-CoA dioxygenase family protein Rv1501 fadE33 (family_assigned) — acyl-CoA dehydrogenase family protein fadE33 fadE32 (family_assigned) — acyl-CoA dehydrogenase family protein fadE32 fadD3 (requalified) — 3-((3aS%2C4S%2C7aS)-7a-methyl-1%2C5-dioxo-octahydr fadD3 fadE31 (family_assigned) — acyl-CoA dehydrogenase family protein fadE31 Rv3559c (family_assigned) — SDR family oxidoreductase Rv3559c pheA (requalified) — prephenate dehydratase pheA kstD (requalified) — 3-oxosteroid 1-dehydrogenase kstD Rv3548c (family_assigned) — SDR family oxidoreductase Rv3548c Rv0148 (family_assigned) — SDR family oxidoreductase Rv0148 Rv3502c (requalified) — 3-oxoacyl-ACP reductase Rv3502c fabG2 (requalified) — 3-oxoacyl-ACP reductase FabG fabG2 fabG4 (requalified) — 3-oxoacyl-ACP reductase fabG4 PE9 (family_assigned) — PE family protein PE9 PE9 Rv1087A (family_assigned) — Conserved hypothetical protein Rv1087A PE27A (family_assigned) — PE family protein PE27A PE27A Rv3552 (family_assigned) — CoA-transferase subunit beta Rv3552 echA20 (family_assigned) — enoyl-CoA hydratase family protein echA20 Rv3553 (requalified) — nitronate monooxygenase Rv3553 Rv3549c (family_assigned) — SDR family oxidoreductase Rv3549c fadE30 (family_assigned) — acyl-CoA dehydrogenase family protein fadE30 PE_PGRS23 (family_assigned) — PE-PGRS family protein PE_PGRS23 PE_PGRS23 mesT (requalified) — epoxide hydrolase MesT mesT PE_PGRS48 (family_assigned) — PE-PGRS family protein PE_PGRS48 PE_PGRS48 PE_PGRS2 (family_assigned) — PE-PGRS family protein PE_PGRS2 PE_PGRS2 PPE35 (family_assigned) — PPE family protein PPE35 PPE35 PPE39 (family_assigned) — PPE family protein PPE39 PPE39

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.