MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3492c · 29 genes shown · anchor mce4D · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3492c (requalified) — Mce associated protein Rv3492c mce4D (family_assigned) — virulence factor Mce family protein mce4D lprN (family_assigned) — Mce family lipoprotein LprN lprN mce4F (family_assigned) — virulence factor Mce family protein mce4F Rv3493c (requalified) — mammalian cell entry protein Rv3493c mce4A (family_assigned) — Mce family protein Mce4A mce4A mce4C (family_assigned) — virulence factor Mce family protein mce4C mce4B (family_assigned) — virulence factor Mce family protein mce4B yrbE4B (family_assigned) — ABC transporter permease yrbE4B yrbE4A (family_assigned) — ABC transporter permease yrbE4A Rv3529c (requalified) — TLR2-mediated response inhibitor Rv3529c Rv1363c (dark) — hypothetical protein Rv1363c mce1A (family_assigned) — Mce family protein Mce1A mce1A mkl (family_assigned) — ABC transporter ATP-binding protein mkl Rv3530c (family_assigned) — SDR family oxidoreductase Rv3530c Rv3531c (family_assigned) — hypothetical protein Rv3531c htpG (requalified) — molecular chaperone HtpG htpG alaS (requalified) — alanine--tRNA ligase alaS rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA mftF (requalified) — mycofactocin biosynthesis glycosyltransferase MftF mftF Rv1362c (family_assigned) — hypothetical protein Rv1362c Rv1973 (family_assigned) — hypothetical protein Rv1973 mce1D (family_assigned) — virulence factor Mce family protein mce1D mce2F (family_assigned) — MlaD family protein mce2F yrbE1A (family_assigned) — ABC transporter permease yrbE1A yrbE1B (family_assigned) — ABC transporter permease yrbE1B mce1B (family_assigned) — virulence factor Mce family protein mce1B mce1C (family_assigned) — MCE family protein mce1C lprK (family_assigned) — virulence factor Mce family protein lprK

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.