MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3488 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3488 (family_assigned) — PadR family transcriptional regulator Rv3488 Rv3840 (family_assigned) — transcriptional regulator Rv3840 cobB (requalified) — NAD-dependent protein deacylase cobB Rv1176c (family_assigned) — PadR family transcriptional regulator Rv1176c Rv3183 (family_assigned) — XRE family transcriptional regulator Rv3183 iniR (family_assigned) — isoniazid response ATPase/transcriptional regulato iniR mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 parD1 (family_assigned) — type II toxin-antitoxin system ParD family antitox parD1 Rv0273c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0273c vapB42 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB42 Rv3736 (family_assigned) — AraC family transcriptional regulator Rv3736 Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c tcrA (family_assigned) — two component DNA binding transcriptional regulato tcrA Rv1674c (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv1674c cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr nadR (requalified) — nicotinamide-nucleotide adenylyltransferase nadR nadE (requalified) — NAD(+) synthase nadE Rv1152 (family_assigned) — GntR family transcriptional regulator Rv1152 pncA (requalified) — pyrazinamidase PncA pncA nadD (requalified) — nicotinate-nucleotide adenylyltransferase nadD sthA (requalified) — Si-specific NAD(P)(+) transhydrogenase sthA fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH Rv0158 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0158 fdxC (family_assigned) — ferredoxin family protein fdxC dapC (requalified) — succinyldiaminopimelate transaminase dapC Rv3182 (family_assigned) — type II toxin-antitoxin system RelE/ParE family to Rv3182 Rv3066 (family_assigned) — TetR/AcrR family transcriptional regulator Rv3066 Rv1776c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1776c embR (requalified) — response regulator transcription factor EmbR embR mce3R (family_assigned) — TetR family transcriptional regulator Mce3R mce3R moaR1 (family_assigned) — transcriptional regulator MoaR1 moaR1 mftB (requalified) — mycofactocin biosynthesis chaperone MftB mftB mftC (requalified) — mycofactocin radical SAM maturase mftC Rv0690c (family_assigned) — DUF2332 domain-containing protein Rv0690c Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c Rv1359 (family_assigned) — transcriptional regulator Rv1359 parE1 (family_assigned) — type II toxin-antitoxin system RelE/ParE family to parE1 vapC30 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC30 lrpA (family_assigned) — transcriptional regulator LrpA lrpA Rv0272c (family_assigned) — alpha/beta hydrolase Rv0272c Rv0274 (family_assigned) — VOC family protein Rv0274 Rv0674 (family_assigned) — PaaX family transcriptional regulator C-terminal d Rv0674 trcR (requalified) — two-component system response regulator TrcR trcR moxR3 (family_assigned) — MoxR family ATPase moxR3 vapC42 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC42

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.