MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3478 · 46 genes shown · anchor PE31 · open gene page → · ← back to 1 hop

Evidence: Min score 0
PPE60 (family_assigned) — PE family protein PPE60 PPE60 PE31 (family_assigned) — PE family protein PE31 PE31 Rv0178 (requalified) — Mce associated membrane protein Rv0178 Rv3479 (requalified) — transmembrane protein Rv3479 PE8 (family_assigned) — PE family protein PE8 PE8 esxA (requalified) — ESAT-6 protein EsxA esxA Rv1638A (family_assigned) — hypothetical protein Rv1638A cobH (requalified) — precorrin-8X methylmutase cobH Rv0139 (family_assigned) — NAD-dependent epimerase/dehydratase family protein Rv0139 Rv1944c (family_assigned) — SEC-C domain-containing protein Rv1944c PPE18 (family_assigned) — PPE family protein PPE18 PPE18 PPE19 (family_assigned) — PPE family protein PPE19 PPE19 Rv1639c (family_assigned) — alpha/beta hydrolase family protein Rv1639c cfp2 (requalified) — Low molecular weight antigen MTB12 cfp2 PPE43 (family_assigned) — PPE family protein PPE43 PPE43 Rv0175 (family_assigned) — hypothetical protein Rv0175 Rv0176 (family_assigned) — RDD family protein Rv0176 Rv0177 (requalified) — Mce associated protein Rv0177 mce1F (family_assigned) — MCE family protein mce1F mce1C (family_assigned) — MCE family protein mce1C phoY1 (requalified) — phosphate signaling complex protein PhoU phoY1 Rv1947 (family_assigned) — hypothetical protein Rv1947 vapB5 (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant vapB5 Rv0470A (family_assigned) — hypothetical protein Rv0470A vapC4 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC4 vapC8 (family_assigned) — PIN domain-containing protein vapC8 PPE15 (family_assigned) — PPE family protein PPE15 PPE15 PPE44 (family_assigned) — PPE family protein PPE44 PPE44 Rv1794 (family_assigned) — ESX secretion-associated protein EspG Rv1794 esxJ (requalified) — type VII secretion system ESX-5 protein EsxJ esxJ esxI (requalified) — type VII secretion system ESX-5 protein EsxL esxI esxB (family_assigned) — type VII secretion system ESX-1 WXG100 family targ esxB eccD1 (family_assigned) — type VII secretion system ESX-1 subunit EccD1 eccD1 eccCa1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCa1 eccB1 (family_assigned) — type VII secretion system ESX-1 subunit EccB1 eccB1 esxO (requalified) — type VII secretion system effector EsxO esxO esxW (requalified) — type VII secretion system protein EsxW esxW Rv2468c (requalified) — hypothetical protein Rv2468c Rv3205c (family_assigned) — hypothetical protein Rv3205c Rv2474c (family_assigned) — hypothetical protein Rv2474c Rv1083 (dark) — hypothetical protein Rv1083 cei (requalified) — envelope integrity protein Cei cei cobIJ (requalified) — precorrin-2 C(20)-methyltransferase cobIJ cobL (requalified) — bifunctional cobalt-precorrin-7 (C(5))-methyltrans cobL cobB (requalified) — cobyrinate a%2Cc-diamide synthase cobB cobG (requalified) — precorrin-3B synthase cobG

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.