MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3441c · 46 genes shown · anchor glmU · open gene page → · ← back to 1 hop

Evidence: Min score 0
mrsA (requalified) — phosphoglucosamine mutase mrsA glmU (requalified) — bifunctional UDP-N-acetylglucosamine diphosphoryla glmU glmS (requalified) — glutamine--fructose-6-phosphate transaminase (isom glmS nagA (requalified) — N-acetylglucosamine-6-phosphate deacetylase nagA Rv3440c (family_assigned) — hypothetical protein Rv3440c Rv3439c (family_assigned) — hypothetical protein Rv3439c rpsI (requalified) — 30S ribosomal protein S9 rpsI rplM (requalified) — 50S ribosomal protein L13 rplM rapZ (requalified) — RNase adapter RapZ rapZ pcnA (requalified) — poly(A) polymerase PcnA pcnA fmu (requalified) — 16S rRNA m5C967 methyltransferase fmu murX (requalified) — phospho-N-acetylmuramoyl-pentapeptide-transferase murX manB (requalified) — D-alpha-D-mannose-1-phosphate guanylyltransferase manB prsA (requalified) — ribose-phosphate diphosphokinase prsA murA (requalified) — UDP-N-acetylglucosamine 1-carboxyvinyltransferase murA pta (requalified) — phosphate acetyltransferase pta murE (requalified) — UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-d murE gltB (family_assigned) — glutamate synthase large subunit gltB glnA2 (family_assigned) — glutamine synthetase family protein glnA2 carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB glnA1 (requalified) — type I glutamate--ammonia ligase glnA1 glnA3 (family_assigned) — glutamine synthetase family protein glnA3 sugI (requalified) — sugar-transport integral membrane protein SugI sugI devB (requalified) — 6-phosphogluconolactonase devB Rv0669c (requalified) — neutral ceramidase Rv0669c Rv3242c (family_assigned) — ComF family protein Rv3242c cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT vapC42 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC42 vapB42 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB42 rpsC (requalified) — 30S ribosomal protein S3 rpsC rplU (requalified) — 50S ribosomal protein L21 rplU rplI (requalified) — 50S ribosomal protein L9 rplI rpmD (requalified) — 50S ribosomal protein L30 rpmD rplD (requalified) — 50S ribosomal protein L4 rplD rplY (requalified) — 50S ribosomal protein L25/general stress protein C rplY rpmG2 (requalified) — 50S ribosomal protein L33 rpmG2 rpmE (requalified) — 50S ribosomal protein L31 rpmE rplR (requalified) — 50S ribosomal protein L18 rplR rpmA (requalified) — 50S ribosomal protein L27 rpmA rplQ (requalified) — 50S ribosomal protein L17 rplQ cuvA (requalified) — carbon utilization/virulence protein CuvA cuvA whiA (family_assigned) — DNA-binding protein WhiA whiA uvrC (family_assigned) — excinuclease ABC subunit UvrC uvrC Rv1417 (family_assigned) — PH domain-containing protein Rv1417 fbiA (requalified) — 2-phospho-L-lactate transferase fbiA ribA2 (requalified) — bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphat ribA2

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.