MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3421c · 46 genes shown · anchor tsaE · open gene page → · ← back to 1 hop

Evidence: Min score 0
tsaB (family_assigned) — tRNA (adenosine(37)-N6)-threonylcarbamoyltransfera tsaB tsaE (family_assigned) — tRNA (adenosine(37)-N6)-threonylcarbamoyltransfera tsaE gcp (family_assigned) — tRNA (adenosine(37)-N6)-threonylcarbamoyltransfera gcp rimI (requalified) — ribosomal protein S18-alanine N-acetyltransferase rimI alr (requalified) — alanine racemase alr birA (requalified) — biotin--[acetyl-CoA-carboxylase] ligase birA Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c gadB (requalified) — glutamate decarboxylase gadB udgB (requalified) — uracil DNA glycosylase udgB groES (requalified) — chaperonin GroES groES uvrD1 (requalified) — ATP-dependent DNA helicase UvrD uvrD1 thiL (requalified) — thiamine-phosphate kinase thiL pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT pheS (family_assigned) — phenylalanine--tRNA ligase subunit alpha pheS ddlA (requalified) — D-alanine--D-alanine ligase DdlA ddlA ald (requalified) — alanine dehydrogenase ald murF (requalified) — UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanin murF accD5 (family_assigned) — acyl-CoA carboxylase subunit beta accD5 accA3 (family_assigned) — acetyl/propionyl/methylcrotonyl-CoA carboxylase su accA3 bioB (requalified) — biotin synthase BioB bioB bisC (requalified) — molybdopterin guanine dinucleotide-containing S/N- bisC accA1 (family_assigned) — acetyl/propionyl/methylcrotonyl-CoA carboxylase su accA1 Rv1722 (requalified) — biotin carboxylase Rv1722 Rv1700 (requalified) — ADP-ribose diphosphatase Rv1700 Rv3672c (requalified) — CoA pyrophosphatase Rv3672c Rv2609c (family_assigned) — NUDIX domain-containing protein Rv2609c rhlE (requalified) — DEAD/DEAH box helicase rhlE deaD (requalified) — DEAD/DEAH box helicase deaD panC (requalified) — pantoate--beta-alanine ligase panC gabT (requalified) — 4-aminobutyrate--2-oxoglutarate transaminase gabT rocA (requalified) — L-glutamate gamma-semialdehyde dehydrogenase rocA Rv0147 (requalified) — aldehyde dehydrogenase Rv0147 pcd (requalified) — piperideine-6-carboxylic acid dehydrogenase pcd Rv0223c (requalified) — aldehyde dehydrogenase Rv0223c Rv1260 (family_assigned) — FAD-binding protein Rv1260 Rv3073c (dark) — DUF488 domain-containing protein Rv3073c Rv1258c (requalified) — MFS transporter Rv1258c Rv1257c (family_assigned) — FAD-linked oxidase C-terminal domain-containing pr Rv1257c gpm1 (requalified) — 2,3-bisphosphoglycerate-dependent phosphoglycerate gpm1 groEL1 (requalified) — chaperonin GroEL groEL1 groEL2 (requalified) — chaperonin GroEL groEL2 grpE (requalified) — nucleotide exchange factor GrpE grpE dnaK (requalified) — molecular chaperone DnaK dnaK htpG (requalified) — molecular chaperone HtpG htpG clpP2 (family_assigned) — ATP-dependent CLP protease proteolytic subunit Clp clpP2 adnB (requalified) — ATP-dependent DNA helicase AdnB adnB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.