MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3420c · 46 genes shown · anchor gcp · open gene page → · ← back to 1 hop

Evidence: Min score 0
rimI (requalified) — ribosomal protein S18-alanine N-acetyltransferase rimI tsaB (family_assigned) — tRNA (adenosine(37)-N6)-threonylcarbamoyltransfera tsaB gcp (family_assigned) — tRNA (adenosine(37)-N6)-threonylcarbamoyltransfera gcp tsaE (family_assigned) — tRNA (adenosine(37)-N6)-threonylcarbamoyltransfera tsaE alr (requalified) — alanine racemase alr gadB (requalified) — glutamate decarboxylase gadB groES (requalified) — chaperonin GroES groES Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c Rv0918 (family_assigned) — DUF1778 domain-containing protein Rv0918 Rv2803 (family_assigned) — hypothetical protein Rv2803 groEL1 (requalified) — chaperonin GroEL groEL1 Rv3424c (dark) — hypothetical protein Rv3424c rimJ (requalified) — ribosomal-protein-alanine acetyltransferase RimJ rimJ birA (requalified) — biotin--[acetyl-CoA-carboxylase] ligase birA pheS (family_assigned) — phenylalanine--tRNA ligase subunit alpha pheS ddlA (requalified) — D-alanine--D-alanine ligase DdlA ddlA ald (requalified) — alanine dehydrogenase ald murF (requalified) — UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanin murF panC (requalified) — pantoate--beta-alanine ligase panC gabT (requalified) — 4-aminobutyrate--2-oxoglutarate transaminase gabT rocA (requalified) — L-glutamate gamma-semialdehyde dehydrogenase rocA Rv0147 (requalified) — aldehyde dehydrogenase Rv0147 pcd (requalified) — piperideine-6-carboxylic acid dehydrogenase pcd Rv0223c (requalified) — aldehyde dehydrogenase Rv0223c groEL2 (requalified) — chaperonin GroEL groEL2 grpE (requalified) — nucleotide exchange factor GrpE grpE dnaK (requalified) — molecular chaperone DnaK dnaK htpG (requalified) — molecular chaperone HtpG htpG clpP2 (family_assigned) — ATP-dependent CLP protease proteolytic subunit Clp clpP2 Rv1700 (requalified) — ADP-ribose diphosphatase Rv1700 Rv3672c (requalified) — CoA pyrophosphatase Rv3672c Rv2609c (family_assigned) — NUDIX domain-containing protein Rv2609c rhlE (requalified) — DEAD/DEAH box helicase rhlE deaD (requalified) — DEAD/DEAH box helicase deaD Rv0919 (family_assigned) — GNAT family N-acetyltransferase Rv0919 vapC24 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC24 Rv2775 (requalified) — GCN5-like N-acetyltransferase Rv2775 wbbL2 (family_assigned) — glycosyltransferase family 2 protein wbbL2 Rv0133 (family_assigned) — GNAT family N-acetyltransferase Rv0133 Rv2170 (requalified) — N-acetyltransferase Rv2170 Rv2802c (dark) — DUF2293 domain-containing protein Rv2802c mazF9 (requalified) — type II toxin-antitoxin system toxin endoribonucle mazF9 mazE9 (requalified) — antitoxin MazE9 mazE9 Rv2669 (requalified) — N-acetyltransferase Rv2669 hycE (family_assigned) — NADH-quinone oxidoreductase subunit C hycE dnaJ1 (requalified) — chaperone protein DnaJ dnaJ1

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.