MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3418c · 39 genes shown · anchor groEL1 · open gene page → · ← back to 1 hop

Evidence: Min score 0
groES (requalified) — chaperonin GroES groES groEL1 (requalified) — chaperonin GroEL groEL1 groEL2 (requalified) — chaperonin GroEL groEL2 grpE (requalified) — nucleotide exchange factor GrpE grpE dnaK (requalified) — molecular chaperone DnaK dnaK htpG (requalified) — molecular chaperone HtpG htpG clpP2 (family_assigned) — ATP-dependent CLP protease proteolytic subunit Clp clpP2 Rv2264c (family_assigned) — Hsp70 family protein Rv2264c Rv3446c (family_assigned) — type VII secretion-associated protein Rv3446c Rv0312 (family_assigned) — Hsp70 family protein Rv0312 clpP1 (family_assigned) — ATP-dependent CLP protease proteolytic subunit 1 clpP1 rplL (requalified) — 50S ribosomal protein L7/L12 rplL nuoC (family_assigned) — NADH-quinone oxidoreductase subunit C nuoC hycE (family_assigned) — NADH-quinone oxidoreductase subunit C hycE dnaJ1 (requalified) — chaperone protein DnaJ dnaJ1 hspR (family_assigned) — heat shock transcriptional regulator HspR hspR clpB (requalified) — chaperone protein ClpB clpB dnaJ2 (requalified) — molecular chaperone DnaJ dnaJ2 clpX (family_assigned) — ATP-dependent Clp protease ATP-binding subunit Clp clpX clpC1 (family_assigned) — ATP-dependent protease ATP-binding subunit ClpC clpC1 tig (requalified) — trigger factor tig Rv3716c (family_assigned) — YbaB/EbfC family nucleoid-associated protein Rv3716c eccD4 (family_assigned) — type VII secretion system ESX-4 subunit EccD4 eccD4 eccC4 (family_assigned) — type VII secretion system ESX-4 FtsK/SpoIIIE famil eccC4 mycP4 (requalified) — type VII secretion system ESX-4 serine protease my mycP4 pirG (requalified) — exported repetitive protein pirG Rv2721c (family_assigned) — LGFP repeat-containing protein Rv2721c rplJ (requalified) — 50S ribosomal protein L10 rplJ rplM (requalified) — 50S ribosomal protein L13 rplM rpsI (requalified) — 30S ribosomal protein S9 rpsI rplK (requalified) — 50S ribosomal protein L11 rplK rplP (requalified) — 50S ribosomal protein L16 rplP rpmA (requalified) — 50S ribosomal protein L27 rpmA nuoF (family_assigned) — NADH-quinone oxidoreductase subunit NuoF nuoF nuoD (family_assigned) — NADH dehydrogenase (quinone) subunit D nuoD nuoA (family_assigned) — NADH-quinone oxidoreductase subunit A nuoA nuoM (family_assigned) — NADH-quinone oxidoreductase subunit M nuoM nuoE (family_assigned) — NADH-quinone oxidoreductase subunit NuoE nuoE nuoB (family_assigned) — NADH-quinone oxidoreductase subunit B nuoB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.