MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3402c · 40 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3402c (family_assigned) — DegT/DnrJ/EryC1/StrS family aminotransferase Rv3402c mbtI (requalified) — salicylate synthase mbtI mbtB (requalified) — phenyloxazoline synthase MbtB mbtB mbtK (requalified) — lysine N-acyltransferase MbtK mbtK irtB (family_assigned) — iron ABC transporter ATP-binding protein/permease irtB irtA (family_assigned) — iron ABC transporter ATP-binding protein/permease irtA mbtJ (requalified) — acetyl hydrolase mbtJ mbtA (requalified) — bifunctional salicyl-AMP ligase/salicyl-S-ArCP syn mbtA mbtE (requalified) — peptide synthetase mbtE mbtF (requalified) — peptide synthetase mbtF Rv1505c (requalified) — acetyltransferase Rv1505c Rv1503c (family_assigned) — Conserved hypothetical protein Rv1503c Rv3404c (requalified) — dTDP-4-amino-4%2C6-dideoxyglucose formyltransferas Rv3404c trpG (requalified) — anthranilate synthase component II trpG trpD (requalified) — anthranilate phosphoribosyltransferase trpD trpC (requalified) — indole-3-glycerol phosphate synthase TrpC trpC entC (requalified) — isochorismate synthase entC pks13 (requalified) — polyketide synthase Pks13 pks13 mbtH (requalified) — mycobactin NRPS accessory protein MbtH mbtH mbtC (requalified) — polyketide synthetase MbtC mbtC pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 mbtG (requalified) — NADPH-dependent L-lysine N(6)-monooxygenase MbtG mbtG Rv0923c (family_assigned) — poly-gamma-glutamate hydrolase family protein Rv0923c rnc (requalified) — ribonuclease III rnc dnaK (requalified) — molecular chaperone DnaK dnaK Rv0435c (family_assigned) — AAA family ATPase Rv0435c lipI (family_assigned) — alpha/beta hydrolase lipI lipY (requalified) — triacylglycerol lipase Lip lipY fas (requalified) — fatty acid synthase fas mbtD (requalified) — mycobactin polyketide synthase MbtD mbtD Rv1504c (family_assigned) — Conserved hypothetical protein Rv1504c Rv1506c (family_assigned) — hypothetical protein Rv1506c Rv1507c (family_assigned) — WbqC family protein Rv1507c Rv1502 (family_assigned) — hypothetical protein Rv1502 Rv1500 (family_assigned) — glycosyltransferase family 2 protein Rv1500 fmu (requalified) — 16S rRNA m5C967 methyltransferase fmu Rv3403c (family_assigned) — FAD/NAD(P)-binding protein Rv3403c pstP (requalified) — phosphoserine/threonine phosphatase PstP pstP nusB (requalified) — transcription antitermination factor NusB nusB priA (family_assigned) — primosomal protein N' priA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.