MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3386 · 44 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3386 (requalified) — transposase Rv3386 Rv3387 (requalified) — transposase Rv3387 Rv2961 (requalified) — transposase Rv2961 vapB46 (requalified) — antitoxin VapB46 vapB46 vapC46 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC46 Rv0790c (family_assigned) — transglutaminase-like domain-containing protein Rv0790c vapC26 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC26 mazF4 (requalified) — type II toxin-antitoxin system toxin endoribonucle mazF4 vapC20 (requalified) — type II toxin-antitoxin system toxin 23S rRNA-spec vapC20 PE_PGRS52 (family_assigned) — PE-PGRS family protein PE_PGRS52 PE_PGRS52 Rv2086 (family_assigned) — hypothetical protein Rv2086 Rv2735c (requalified) — three-Cys-motif partner protein TcmP Rv2735c Rv2960c (dark) — hypothetical protein Rv2960c vapC47 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC47 vapC35 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC35 vapB47 (requalified) — antitoxin VapB47 vapB47 vapB5 (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant vapB5 vapC12 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC12 vapC9 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC9 vapC5 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC5 Rv0791c (requalified) — LLM class flavin-dependent oxidoreductase Rv0791c Rv0792c (family_assigned) — GntR family transcriptional regulator Rv0792c Rv0793 (family_assigned) — putative quinol monooxygenase Rv0793 Rv0789c (family_assigned) — hypothetical protein Rv0789c vapB26 (requalified) — type II toxin-antitoxin system antitoxin VapB26 vapB26 Rv0580c (requalified) — mycobacterial cell wall protein Rv0580c Rv0580c vapC18 (family_assigned) — PIN domain nuclease vapC18 mazE4 (requalified) — type II toxin-antitoxin system antitoxin MazE4 mazE4 meaB (requalified) — methylmalonyl Co-A mutase-associated GTPase MeaB meaB mutB (requalified) — methylmalonyl-CoA mutase mutB mutA (family_assigned) — methylmalonyl-CoA mutase small subunit mutA lipL (family_assigned) — serine hydrolase domain-containing protein lipL vapB20 (requalified) — type II toxin-antitoxin system antitoxin VapB20 vapB20 Rv2548A (dark) — hypothetical protein Rv2548A vapC24 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC24 Rv0611c (family_assigned) — DUF4926 domain-containing protein Rv0611c zmp1 (requalified) — zinc metalloprotease Zmp1 zmp1 PPE5 (family_assigned) — PPE family protein PPE5 PPE5 PPE2 (family_assigned) — PPE family protein PPE2 PPE2 Rv2085 (family_assigned) — hypothetical protein Rv2085 Rv2082 (dark) — DUF5631 domain-containing protein Rv2082 Rv2087 (family_assigned) — Conserved hypothetical protein Rv2087 Rv3349c (requalified) — transposase Rv3349c eccD4 (family_assigned) — type VII secretion system ESX-4 subunit EccD4 eccD4

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.