MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3366 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
spoU (requalified) — tRNA (cytidine(34)-2'-O)-methyltransferase spoU mfpA (requalified) — pentapeptide repeat protein MfpA mfpA Rv3365c (requalified) — sensor histidine kinase Rv3365c tig (requalified) — trigger factor tig Rv3363c (family_assigned) — DUF742 domain-containing protein Rv3363c Rv3362c (family_assigned) — ATP/GTP-binding protein Rv3362c Rv3364c (requalified) — serine protease inhibitor Rv3364c frr (requalified) — ribosome recycling factor frr PE_PGRS51 (family_assigned) — PE-PGRS family protein PE_PGRS51 PE_PGRS51 fmu (requalified) — 16S rRNA m5C967 methyltransferase fmu trmB (requalified) — tRNA (guanosine(46)-N7)-methyltransferase TrmB trmB mgtA (requalified) — GDP-mannose-dependent alpha-mannosyltransferase mgtA rsmD (requalified) — 16S rRNA (guanine(966)-N(2))-methyltransferase Rsm rsmD gyrB (family_assigned) — DNA topoisomerase (ATP-hydrolyzing) subunit B gyrB Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c bkdB (family_assigned) — 3-methyl-2-oxobutanoate dehydrogenase subunit beta bkdB rpsG (requalified) — 30S ribosomal protein S7 rpsG rplW (requalified) — 50S ribosomal protein L23 rplW rplC (requalified) — 50S ribosomal protein L3 rplC rplM (requalified) — 50S ribosomal protein L13 rplM rpsB (requalified) — 30S ribosomal protein S2 rpsB rplB (requalified) — 50S ribosomal protein L2 rplB fadB (requalified) — fatty oxidation protein FadB fadB fixB (family_assigned) — electron transfer flavoprotein subunit alpha/FixB fixB ftsY (requalified) — signal recognition particle-docking protein FtsY ftsY Rv1004c (family_assigned) — hypothetical protein Rv1004c Rv0585c (family_assigned) — lysylphosphatidylglycerol synthase transmembrane d Rv0585c rplT (requalified) — 50S ribosomal protein L20 rplT rplQ (requalified) — 50S ribosomal protein L17 rplQ rpsO (requalified) — 30S ribosomal protein S15 rpsO rplP (requalified) — 50S ribosomal protein L16 rplP ctaD (family_assigned) — cytochrome c oxidase subunit I ctaD ctaC (family_assigned) — cytochrome c oxidase subunit II ctaC qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB qcrA (requalified) — hypothetical protein qcrA ctaE (family_assigned) — heme-copper oxidase subunit III ctaE qcrC (requalified) — cytochrome c qcrC fmt (requalified) — methionyl-tRNA formyltransferase fmt Rv3404c (requalified) — dTDP-4-amino-4%2C6-dideoxyglucose formyltransferas Rv3404c pstP (requalified) — phosphoserine/threonine phosphatase PstP pstP rplJ (requalified) — 50S ribosomal protein L10 rplJ rpsJ (requalified) — 30S ribosomal protein S10 rpsJ ligA (requalified) — NAD-dependent DNA ligase LigA ligA Rv0207c (family_assigned) — NYN domain-containing protein Rv0207c trmI (requalified) — tRNA (adenine(58)-N(1))-methyltransferase TrmI trmI mmpL3 (requalified) — trehalose monomycolate RND transporter MmpL3 mmpL3

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.