MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3365c · 45 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3365c (requalified) — sensor histidine kinase Rv3365c Rv3363c (family_assigned) — DUF742 domain-containing protein Rv3363c Rv3362c (family_assigned) — ATP/GTP-binding protein Rv3362c Rv3364c (requalified) — serine protease inhibitor Rv3364c mfpA (requalified) — pentapeptide repeat protein MfpA mfpA Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c bkdB (family_assigned) — 3-methyl-2-oxobutanoate dehydrogenase subunit beta bkdB Rv1734c (family_assigned) — hypothetical protein Rv1734c bkdC (family_assigned) — dihydrolipoamide acetyltransferase family protein bkdC dlaT (requalified) — 2-oxoglutarate dehydrogenase%2C E2 component%2C di dlaT prsA (requalified) — ribose-phosphate diphosphokinase prsA PE_PGRS16 (family_assigned) — PE-PGRS family protein PE_PGRS16 PE_PGRS16 Rv1157c (dark) — hypothetical protein Rv1157c fadB (requalified) — fatty oxidation protein FadB fadB fixB (family_assigned) — electron transfer flavoprotein subunit alpha/FixB fixB ftsY (requalified) — signal recognition particle-docking protein FtsY ftsY Rv1004c (family_assigned) — hypothetical protein Rv1004c spoU (requalified) — tRNA (cytidine(34)-2'-O)-methyltransferase spoU Rv0585c (family_assigned) — lysylphosphatidylglycerol synthase transmembrane d Rv0585c gyrB (family_assigned) — DNA topoisomerase (ATP-hydrolyzing) subunit B gyrB lpdC (requalified) — dihydrolipoyl dehydrogenase lpdC Rv0794c (requalified) — oxidoreductase Rv0794c garA (requalified) — glycogen accumulation regulator GarA garA sthA (requalified) — Si-specific NAD(P)(+) transhydrogenase sthA mtr (requalified) — mycothione reductase mtr lpdA (requalified) — NAD(P)H-quinone dehydrogenase lpdA bkdA (family_assigned) — pyruvate dehydrogenase (acetyl-transferring) E1 co bkdA Rv0843 (family_assigned) — thiamine pyrophosphate-dependent dehydrogenase E1 Rv0843 aceE (requalified) — pyruvate dehydrogenase E1 component aceE accA1 (family_assigned) — acetyl/propionyl/methylcrotonyl-CoA carboxylase su accA1 sucC (family_assigned) — ADP-forming succinate--CoA ligase subunit beta sucC glmU (requalified) — bifunctional UDP-N-acetylglucosamine diphosphoryla glmU tkt (requalified) — transketolase tkt rbsK (requalified) — ribokinase RbsK rbsK purF (requalified) — amidophosphoribosyltransferase purF Rv2082 (dark) — DUF5631 domain-containing protein Rv2082 PPE34 (family_assigned) — PPE family protein PPE34 PPE34 PPE54 (family_assigned) — PPE family protein PPE54 PPE54 Rv3899c (family_assigned) — hypothetical protein Rv3899c PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 Rv1158c (dark) — hypothetical protein Rv1158c Rv2721c (family_assigned) — LGFP repeat-containing protein Rv2721c ripA (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipA ripA pirG (requalified) — exported repetitive protein pirG

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.