MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3360 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3360 (family_assigned) — FHA domain-containing protein Rv3360 Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c pknB (family_assigned) — Stk1 family PASTA domain-containing Ser/Thr kinase pknB Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c Rv1277 (family_assigned) — hypothetical protein Rv1277 Rv1278 (family_assigned) — AAA family ATPase Rv1278 cut3 (family_assigned) — cutinase family protein cut3 cut5a (family_assigned) — Probable cutinase precursor [first part] Cut5a cut5a Rv3483c (family_assigned) — LppP/LprE family lipoprotein Rv3483c cut5b (family_assigned) — Probable cutinase [second part] Cut5b cut5b cut2 (family_assigned) — cutinase family protein cut2 cut1 (requalified) — cutinase cut1 Rv0434 (family_assigned) — LON peptidase substrate-binding domain-containing Rv0434 lpdC (requalified) — dihydrolipoyl dehydrogenase lpdC Rv0794c (requalified) — oxidoreductase Rv0794c garA (requalified) — glycogen accumulation regulator GarA garA sthA (requalified) — Si-specific NAD(P)(+) transhydrogenase sthA mtr (requalified) — mycothione reductase mtr lpdA (requalified) — NAD(P)H-quinone dehydrogenase lpdA pstP (requalified) — phosphoserine/threonine phosphatase PstP pstP pknA (requalified) — serine/threonine protein kinase PknA pknA fhaA (requalified) — cell division-associated protein FhaA fhaA fhaB (family_assigned) — FHA domain-containing protein fhaB rodA (requalified) — cell shape-determining peptidoglycan glycosyltrans rodA Rv1354c (requalified) — bifunctional diguanylate cyclase/phosphodiesterase Rv1354c fbiC (requalified) — bifunctional FO biosynthesis protein CofGH fbiC rsfA (requalified) — anti-sigma-F factor antagonist RsfA rsfA rsfB (family_assigned) — STAS domain-containing protein rsfB Rv1904 (requalified) — anti-sigma factor antagonist Rv1904 Rv2638 (requalified) — anti-sigma factor antagonist Rv2638 polA (requalified) — DNA polymerase I polA Rv2090 (requalified) — 5'-3' exonuclease Rv2090 dinG (requalified) — ATP-dependent helicase DinG dinG Rv1279 (family_assigned) — GMC family oxidoreductase N-terminal domain-contai Rv1279 recA (requalified) — intein-containing recombinase RecA recA topA (requalified) — type I DNA topoisomerase topA eccB4 (family_assigned) — type VII secretion system ESX-4 subunit EccB4 eccB4 cut4 (requalified) — cutinase Cut4 cut4 Rv1747 (family_assigned) — ATP-binding cassette domain-containing protein Rv1747 ptbB (requalified) — tyrosine-protein phosphatase PtbB ptbB nuoM (family_assigned) — NADH-quinone oxidoreductase subunit M nuoM Rv3725 (requalified) — oxidoreductase Rv3725 Rv3482c (dark) — DUF2510 domain-containing protein Rv3482c PE_PGRS12 (family_assigned) — PE-PGRS family protein PE_PGRS12 PE_PGRS12 Rv0185 (family_assigned) — TIGR04338 family metallohydrolase Rv0185 Rv1125 (family_assigned) — WS/DGAT domain-containing protein Rv1125

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.