MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3356c · 37 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
folD (requalified) — bifunctional methylenetetrahydrofolate dehydrogena folD glyA2 (requalified) — serine hydroxymethyltransferase glyA2 glyA1 (requalified) — serine hydroxymethyltransferase glyA1 purH (requalified) — bifunctional phosphoribosylaminoimidazolecarboxami purH purN (requalified) — phosphoribosylglycinamide formyltransferase purN gcvT (requalified) — aminomethyltransferase gcvT fmt (requalified) — methionyl-tRNA formyltransferase fmt purU (requalified) — formyltetrahydrofolate deformylase purU thyA (requalified) — thymidylate synthase ThyA thyA thyX (requalified) — FAD-dependent thymidylate synthase thyX Rv0992c (requalified) — 5-formyltetrahydrofolate cyclo-ligase Rv0992c purT (requalified) — phosphoribosylglycinamide formyltransferase 2 purT Rv3355c (dark) — DUF3017 domain-containing protein Rv3355c sdaA (requalified) — L-serine ammonia-lyase sdaA gcvB (requalified) — aminomethyl-transferring glycine dehydrogenase gcvB gcvH (requalified) — glycine cleavage system protein GcvH gcvH purB (requalified) — adenylosuccinate lyase purB purA (requalified) — adenylosuccinate synthase purA purD (requalified) — phosphoribosylamine--glycine ligase purD purM (requalified) — phosphoribosylformylglycinamidine cyclo-ligase purM purQ (family_assigned) — phosphoribosylformylglycinamidine synthase subunit purQ purL (family_assigned) — phosphoribosylformylglycinamidine synthase subunit purL Rv0787A (family_assigned) — hypothetical protein Rv0787A lpdC (requalified) — dihydrolipoyl dehydrogenase lpdC fmu (requalified) — 16S rRNA m5C967 methyltransferase fmu dfrA (requalified) — dihydrofolate reductase dfrA metH (requalified) — methionine synthase metH dut (requalified) — deoxyuridine 5'-triphosphate nucleotidohydrolase dut tmk (requalified) — dTMP kinase tmk Rv0991c (family_assigned) — FmdB family zinc ribbon protein Rv0991c galU (requalified) — UTP--glucose-1-phosphate uridylyltransferase galU moeA1 (requalified) — molybdopterin molybdenumtransferase 1 moeA1 Rv3359 (requalified) — NADH:flavin oxidoreductase Rv3359 relJ (requalified) — type II toxin-antitoxin system antitoxin RelJ relJ relK (family_assigned) — Txe/YoeB family addiction module toxin relK lprD (family_assigned) — hypothetical protein lprD Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.