MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3352c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3352c (requalified) — oxidoreductase Rv3352c Rv3351c (family_assigned) — hypothetical protein Rv3351c plsB1 (requalified) — lysophospholipid acyltransferase plsB1 plsB2 (requalified) — glycerol-3-phosphate 1-O-acyltransferase plsB2 ubiA (requalified) — decaprenyl-phosphate phosphoribosyltransferase ubiA atpD (family_assigned) — F0F1 ATP synthase subunit beta atpD atpE (family_assigned) — F0F1 ATP synthase subunit C atpE Rv3353c (requalified) — oxidoreductase Rv3353c Rv3633 (family_assigned) — phytanoyl-CoA dioxygenase family protein Rv3633 Rv1501 (family_assigned) — phytanoyl-CoA dioxygenase family protein Rv1501 mftD (requalified) — pre-mycofactocin synthase MftD mftD lldD2 (requalified) — quinone-dependent L-lactate dehydrogenase lldD2 fixA (family_assigned) — electron transfer flavoprotein subunit beta/FixA f fixA Rv0210 (family_assigned) — hypothetical protein Rv0210 Rv0941c (family_assigned) — STAS domain-containing protein Rv0941c fadD11 (requalified) — fatty-acid--CoA ligase FadD11 fadD11 gpdA2 (requalified) — NAD(P)H-dependent glycerol-3-phosphate dehydrogena gpdA2 gpdA1 (requalified) — NAD(P)H-dependent glycerol-3-phosphate dehydrogena gpdA1 Rv2182c (family_assigned) — lysophospholipid acyltransferase family protein Rv2182c glpD2 (requalified) — glycerol-3-phosphate dehydrogenase/oxidase glpD2 plsC (family_assigned) — HAD-IB family hydrolase plsC Rv2484c (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr Rv2484c Rv3807c (requalified) — decaprenylphosphoryl-5-phosphoribose phosphatase Rv3807c aftB (requalified) — terminal beta-(1->2)-arabinofuranosyltransferase aftB glfT2 (requalified) — galactofuranosyl transferase GlfT2 glfT2 dprE1 (requalified) — decaprenylphospho-beta-D-ribofuranose 2-dehydrogen dprE1 glf (requalified) — UDP-galactopyranose mutase glf lgt (requalified) — prolipoprotein diacylglyceryl transferase lgt atpF (family_assigned) — F0F1 ATP synthase subunit B atpF atpA (family_assigned) — F0F1 ATP synthase subunit alpha atpA atpG (family_assigned) — F0F1 ATP synthase subunit gamma atpG atpB (family_assigned) — F0F1 ATP synthase subunit A atpB atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH atpC (family_assigned) — F0F1 ATP synthase subunit epsilon atpC Rv3354 (requalified) — DUF732 domain-containing protein Rv3354 Rv1867 (requalified) — acetyl-CoA acetyltransferase Rv1867 Rv2280 (family_assigned) — Probable dehydrogenase Rv2280 Rv1774 (requalified) — FAD-binding oxidoreductase Rv1774 Rv1257c (family_assigned) — FAD-linked oxidase C-terminal domain-containing pr Rv1257c Rv1771 (requalified) — L-gulono-1%2C4-lactone dehydrogenase Rv1771 Rv1500 (family_assigned) — glycosyltransferase family 2 protein Rv1500 Rv1502 (family_assigned) — hypothetical protein Rv1502 Rv1499 (requalified) — glycosyltransferase (part1) Rv1499 mftC (requalified) — mycofactocin radical SAM maturase mftC mftB (requalified) — mycofactocin biosynthesis chaperone MftB mftB pykA (requalified) — pyruvate kinase pykA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.