MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3328c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
sigJ (family_assigned) — sigma-70 family RNA polymerase sigma factor SigJ sigJ Rv1931c (family_assigned) — transcriptional regulator Rv1931c Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c sirR (family_assigned) — manganese-binding transcriptional regulator MntR sirR Rv3736 (family_assigned) — AraC family transcriptional regulator Rv3736 Rv0377 (family_assigned) — LysR family transcriptional regulator Rv0377 Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 vapB42 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB42 Rv1773c (family_assigned) — IclR family transcriptional regulator Rv1773c Rv1359 (family_assigned) — transcriptional regulator Rv1359 moxR3 (family_assigned) — MoxR family ATPase moxR3 Rv1930c (requalified) — glutamine amidotransferase Rv1930c sigI (requalified) — RNA polymerase sigma factor SigI sigI virS (family_assigned) — AraC family transcriptional regulator virS Rv1724c (dark) — hypothetical protein Rv1724c Rv3055 (family_assigned) — helix-turn-helix domain-containing protein Rv3055 cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr embR (requalified) — response regulator transcription factor EmbR embR kdpE (requalified) — two-component system response regulator KdpE kdpE Rv3066 (family_assigned) — TetR/AcrR family transcriptional regulator Rv3066 Rv1019 (family_assigned) — TetR/AcrR family transcriptional regulator Rv1019 Rv0273c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0273c Rv1985c (family_assigned) — ArgP/LysG family DNA-binding transcriptional regul Rv1985c mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv3840 (family_assigned) — transcriptional regulator Rv3840 Rv0372c (family_assigned) — XdhC family protein Rv0372c Rv0368c (family_assigned) — VWA domain-containing protein Rv0368c Rv0375c (family_assigned) — carbon monoxyde dehydrogenase medium subunit Rv0375c oxyS (family_assigned) — LysR family transcriptional regulator OxyS oxyS Rv1167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1167c Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c Rv0494 (family_assigned) — HTH-type transcriptional regulator Rv0494 iniR (family_assigned) — isoniazid response ATPase/transcriptional regulato iniR vapC42 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC42 hsdS (family_assigned) — restriction endonuclease subunit S hsdS Rv2762c (family_assigned) — winged helix-turn-helix domain-containing protein Rv2762c Rv3488 (family_assigned) — PadR family transcriptional regulator Rv3488 Rv1776c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1776c Rv1358 (family_assigned) — LuxR C-terminal-related transcriptional regulator Rv1358 Rv0894 (family_assigned) — hypothetical protein Rv0894 Rv3163c (dark) — DUF58 domain-containing protein Rv3163c Rv3165c (dark) — hypothetical protein Rv3165c Rv3166c (family_assigned) — DUF4129 domain-containing protein Rv3166c Rv3162c (family_assigned) — integral membrane protein Rv3162c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.