MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3315c · 46 genes shown · anchor deoA · open gene page → · ← back to 1 hop

Evidence: Min score 0
cdd (requalified) — cytidine deaminase cdd deoA (requalified) — thymidine phosphorylase deoA deoD (requalified) — purine-nucleoside phosphorylase deoD add (requalified) — adenosine deaminase add sdhC (family_assigned) — succinate dehydrogenase%2C cytochrome b556 subunit sdhC sdhD (family_assigned) — succinate dehydrogenase hydrophobic membrane ancho sdhD deoC (requalified) — deoxyribose-phosphate aldolase deoC sdhA (family_assigned) — succinate dehydrogenase flavoprotein subunit sdhA sdhB (family_assigned) — succinate dehydrogenase iron-sulfur subunit sdhB glyS (requalified) — glycine--tRNA ligase glyS Rv3312A (requalified) — pilin Rv3312A iunH (requalified) — nucleoside hydrolase IunH iunH nadE (requalified) — NAD(+) synthase nadE upp (requalified) — uracil phosphoribosyltransferase upp pyrR (family_assigned) — bifunctional pyr operon transcriptional regulator/ pyrR pmmB (requalified) — phospho-sugar mutase pmmB apt (requalified) — adenine phosphoribosyltransferase apt hpt (requalified) — hypoxanthine phosphoribosyltransferase hpt adoK (family_assigned) — carbohydrate kinase family protein adoK frdB (family_assigned) — succinate dehydrogenase iron-sulfur subunit frdB Rv0247c (family_assigned) — succinate dehydrogenase/fumarate reductase iron-su Rv0247c frdA (family_assigned) — fumarate reductase (quinol) flavoprotein subunit frdA rbsK (requalified) — ribokinase RbsK rbsK tkt (requalified) — transketolase tkt tal (requalified) — transaldolase tal fba (requalified) — class II fructose-bisphosphate aldolase fba Rv0476 (requalified) — transmembrane protein Rv0476 fum (requalified) — class II fumarate hydratase fum Rv0248c (family_assigned) — fumarate reductase/succinate dehydrogenase flavopr Rv0248c sucC (family_assigned) — ADP-forming succinate--CoA ligase subunit beta sucC htpG (requalified) — molecular chaperone HtpG htpG ppa (requalified) — inorganic diphosphatase ppa Rv1515c (family_assigned) — methyltransferase domain-containing protein Rv1515c zur (requalified) — zinc uptake transcriptional repressor Zur zur serS (requalified) — serine--tRNA ligase serS ileS (requalified) — isoleucine--tRNA ligase ileS Rv3312c (family_assigned) — alpha/beta hydrolase Rv3312c Rv0309 (requalified) — L%2CD-transpeptidase Rv0309 Rv1824 (family_assigned) — small basic family protein Rv1824 pncA (requalified) — pyrazinamidase PncA pncA cobB (requalified) — NAD-dependent protein deacylase cobB nadR (requalified) — nicotinamide-nucleotide adenylyltransferase nadR nadD (requalified) — nicotinate-nucleotide adenylyltransferase nadD ppnK (requalified) — NAD kinase ppnK sthA (requalified) — Si-specific NAD(P)(+) transhydrogenase sthA nudC (requalified) — NAD(+) diphosphatase nudC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.