MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3310 · 45 genes shown · anchor upp · open gene page → · ← back to 1 hop

Evidence: Min score 0
sapM (requalified) — phosphatidylinositol-3-phosphatase sapM plcA (requalified) — membrane-associated phospholipase A plcA plcC (requalified) — phospholipase C plcC plcB (requalified) — membrane-associated phospholipase B plcB upp (requalified) — uracil phosphoribosyltransferase upp Rv3311 (family_assigned) — primosomal protein Rv3311 Rv0090 (dark) — DUF2127 domain-containing protein Rv0090 Rv2963 (requalified) — permease Rv2963 Rv0180c (family_assigned) — YhgE/Pip domain-containing protein Rv0180c Rv2638 (requalified) — anti-sigma factor antagonist Rv2638 pgsA1 (requalified) — CDP-diacylglycerol--inositol 3-phosphatidyltransfe pgsA1 nudC (requalified) — NAD(+) diphosphatase nudC Rv2252 (requalified) — diacylglycerol kinase Rv2252 suhB (requalified) — inositol-1-monophosphatase SuhB suhB impA (family_assigned) — inositol monophosphatase family protein impA pgsA2 (family_assigned) — CDP-alcohol phosphatidyltransferase family protein pgsA2 deoA (requalified) — thymidine phosphorylase deoA pyrH (requalified) — UMP kinase pyrH pyrF (requalified) — orotidine-5'-phosphate decarboxylase pyrF rpiB (requalified) — ribose-5-phosphate isomerase B rpiB deoD (requalified) — purine-nucleoside phosphorylase deoD guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA Rv1109c (requalified) — lipid droplet-associated protein Rv1109c Rv3212 (family_assigned) — hypothetical protein Rv3212 Rv3438 (family_assigned) — alpha/beta hydrolase Rv3438 Rv2520c (dark) — DUF3618 domain-containing protein Rv2520c Rv2446c (dark) — DUF4233 domain-containing protein Rv2446c Rv2577 (family_assigned) — metallophosphoesterase family protein Rv2577 Rv0089 (requalified) — methyltransferase Rv0089 Rv1619 (requalified) — bifunctional lysylphosphatidylglycerol flippase/sy Rv1619 cysK2 (requalified) — cysteine synthase CysK cysK2 Rv0849 (requalified) — MFS transporter Rv0849 lpqS (requalified) — lipoprotein LpqS lpqS mmcO (requalified) — multicopper oxidase MmcO mmcO purU (requalified) — formyltetrahydrofolate deformylase purU Rv0181c (family_assigned) — pirin family protein Rv0181c Rv1006 (family_assigned) — hypothetical protein Rv1006 hsr1 (requalified) — hypothetical protein hsr1 Rv3434c (family_assigned) — rhomboid-like protein Rv3434c Rv2598 (family_assigned) — DUF2617 family protein Rv2598 Rv1868 (family_assigned) — NAD(P)H-binding protein Rv1868 Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c rsbW (requalified) — anti-sigma B factor RsbW rsbW Rv3899c (family_assigned) — hypothetical protein Rv3899c Rv1354c (requalified) — bifunctional diguanylate cyclase/phosphodiesterase Rv1354c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.