MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3309c · 45 genes shown · anchor rpiB · open gene page → · ← back to 1 hop

Evidence: Min score 0
upp (requalified) — uracil phosphoribosyltransferase upp deoA (requalified) — thymidine phosphorylase deoA pyrH (requalified) — UMP kinase pyrH pyrF (requalified) — orotidine-5'-phosphate decarboxylase pyrF rpiB (requalified) — ribose-5-phosphate isomerase B rpiB deoD (requalified) — purine-nucleoside phosphorylase deoD guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA pyrR (family_assigned) — bifunctional pyr operon transcriptional regulator/ pyrR sapM (requalified) — phosphatidylinositol-3-phosphatase sapM glyA2 (requalified) — serine hydroxymethyltransferase glyA2 glyA1 (requalified) — serine hydroxymethyltransferase glyA1 rpsB (requalified) — 30S ribosomal protein S2 rpsB Rv3311 (family_assigned) — primosomal protein Rv3311 cdd (requalified) — cytidine deaminase cdd deoC (requalified) — deoxyribose-phosphate aldolase deoC add (requalified) — adenosine deaminase add frr (requalified) — ribosome recycling factor frr atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH ndkA (requalified) — nucleoside-diphosphate kinase ndkA tsf (requalified) — translation elongation factor Ts tsf carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB carA (family_assigned) — glutamine-hydrolyzing carbamoyl-phosphate synthase carA pyrC (requalified) — dihydroorotase pyrC pyrB (family_assigned) — aspartate carbamoyltransferase catalytic subunit pyrB pyrE (requalified) — orotate phosphoribosyltransferase pyrE rpe (requalified) — ribulose-phosphate 3-epimerase rpe tkt (requalified) — transketolase tkt gnd1 (requalified) — 6-phosphogluconate dehydrogenase gnd1 rbsK (requalified) — ribokinase RbsK rbsK gnd2 (requalified) — decarboxylating 6-phosphogluconate dehydrogenase gnd2 pmmB (requalified) — phospho-sugar mutase pmmB apt (requalified) — adenine phosphoribosyltransferase apt hpt (requalified) — hypoxanthine phosphoribosyltransferase hpt guaB2 (requalified) — IMP dehydrogenase guaB2 guaB1 (family_assigned) — GuaB1 family IMP dehydrogenase-related protein guaB1 guaB3 (family_assigned) — GuaB3 family IMP dehydrogenase-related protein guaB3 argS (requalified) — arginine--tRNA ligase argS rplK (requalified) — 50S ribosomal protein L11 rplK Rv1382 (requalified) — transporter Rv1382 plcA (requalified) — membrane-associated phospholipase A plcA plcC (requalified) — phospholipase C plcC plcB (requalified) — membrane-associated phospholipase B plcB sdaA (requalified) — L-serine ammonia-lyase sdaA gcvB (requalified) — aminomethyl-transferring glycine dehydrogenase gcvB gcvT (requalified) — aminomethyltransferase gcvT

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.