MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3308 · 46 genes shown · anchor deoD · open gene page → · ← back to 1 hop

Evidence: Min score 0
pmmB (requalified) — phospho-sugar mutase pmmB deoD (requalified) — purine-nucleoside phosphorylase deoD manB (requalified) — D-alpha-D-mannose-1-phosphate guanylyltransferase manB manA (requalified) — mannose-6-phosphate isomerase%2C class I manA pmmA (requalified) — phosphomannomutase/phosphoglucomutase pmmA amiA1 (requalified) — N-acyl-L-amino acid amidohydrolase AmiA amiA1 amiB1 (requalified) — amidase AmiB amiB1 deoC (requalified) — deoxyribose-phosphate aldolase deoC trpS (requalified) — tryptophan--tRNA ligase trpS Rv2417c (family_assigned) — DegV family protein Rv2417c cdd (requalified) — cytidine deaminase cdd helZ (requalified) — DEAD/DEAH box helicase helZ treZ (requalified) — malto-oligosyltrehalose trehalohydrolase treZ deoA (requalified) — thymidine phosphorylase deoA apt (requalified) — adenine phosphoribosyltransferase apt add (requalified) — adenosine deaminase add hpt (requalified) — hypoxanthine phosphoribosyltransferase hpt rmlD (requalified) — dTDP-4-dehydrorhamnose reductase rmlD gmdA (requalified) — GDP-mannose 4%2C6-dehydratase gmdA wbbL1 (requalified) — N-acetylglucosaminyl-diphospho-decaprenol L-rhamno wbbL1 lcp1 (requalified) — phosphotransferase Lcp1 lcp1 Rv3256c (requalified) — TobH protein Rv3256c pgi (requalified) — glucose-6-phosphate isomerase pgi pfkB (family_assigned) — 1-phosphofructokinase family hexose kinase pfkB glmS (requalified) — glutamine--fructose-6-phosphate transaminase (isom glmS glgP (family_assigned) — glycosyltransferase family 1 protein glgP Rv3259 (family_assigned) — metallopeptidase family protein Rv3259 dapD (requalified) — 2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxyla dapD lysA (requalified) — diaminopimelate decarboxylase lysA lpdA (requalified) — NAD(P)H-quinone dehydrogenase lpdA Rv0074 (family_assigned) — amidohydrolase family protein Rv0074 Rv3304 (requalified) — gamma-glutamylcyclotransferase Rv3304 rbsK (requalified) — ribokinase RbsK rbsK tkt (requalified) — transketolase tkt tal (requalified) — transaldolase tal fba (requalified) — class II fructose-bisphosphate aldolase fba Rv0476 (requalified) — transmembrane protein Rv0476 yhjD (requalified) — inner membrane protein YhjD yhjD Rv3338 (family_assigned) — Conserved hypothetical protein Rv3338 Rv3337 (family_assigned) — Conserved hypothetical protein Rv3337 pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT serS (requalified) — serine--tRNA ligase serS Rv2974c (family_assigned) — hypothetical protein Rv2974c gpgP (requalified) — glucosyl-3-phosphoglycerate phosphatase gpgP octT (requalified) — diglucosylglycerate octanoyltransferase octT nadD (requalified) — nicotinate-nucleotide adenylyltransferase nadD

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.