MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3306c · 46 genes shown · anchor amiA1 · open gene page → · ← back to 1 hop

Evidence: Min score 0
amiB1 (requalified) — amidase AmiB amiB1 amiA1 (requalified) — N-acyl-L-amino acid amidohydrolase AmiA amiA1 deoD (requalified) — purine-nucleoside phosphorylase deoD pmmB (requalified) — phospho-sugar mutase pmmB dapD (requalified) — 2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxyla dapD Rv0074 (family_assigned) — amidohydrolase family protein Rv0074 Rv3304 (requalified) — gamma-glutamylcyclotransferase Rv3304 Rv3253c (requalified) — amino acid permease Rv3253c ripA (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipA ripA amiD (requalified) — amidase amiD amiC (requalified) — amidase amiC ripB (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipB ripB Rv3915 (requalified) — peptidoglycan hydrolase Rv3915 lysA (requalified) — diaminopimelate decarboxylase lysA lpdA (requalified) — NAD(P)H-quinone dehydrogenase lpdA cdd (requalified) — cytidine deaminase cdd deoA (requalified) — thymidine phosphorylase deoA apt (requalified) — adenine phosphoribosyltransferase apt add (requalified) — adenosine deaminase add hpt (requalified) — hypoxanthine phosphoribosyltransferase hpt manB (requalified) — D-alpha-D-mannose-1-phosphate guanylyltransferase manB manA (requalified) — mannose-6-phosphate isomerase%2C class I manA pmmA (requalified) — phosphomannomutase/phosphoglucomutase pmmA dapB (requalified) — 4-hydroxy-tetrahydrodipicolinate reductase dapB dapC (requalified) — pyridoxal phosphate-dependent aminotransferase dapC argD (requalified) — acetylornithine transaminase argD dapE (requalified) — succinyl-diaminopimelate desuccinylase DapE dapE guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA Rv0075 (family_assigned) — MalY/PatB family protein Rv0075 Rv0073 (family_assigned) — ATP-binding cassette domain-containing protein Rv0073 Rv0072 (family_assigned) — FtsX-like permease family protein Rv0072 Rv0552 (requalified) — amidohydrolase Rv0552 Rv2052c (requalified) — amidohydrolase Rv2052c Rv1922 (requalified) — serine hydrolase Rv1922 glpD2 (requalified) — glycerol-3-phosphate dehydrogenase/oxidase glpD2 Rv3231c (family_assigned) — hypothetical protein Rv3231c Rv3916c (requalified) — acetyltransferase Rv3916c Rv3118 (family_assigned) — hypothetical protein Rv3118 Rv0814c (family_assigned) — DUF1416 domain-containing protein Rv0814c rubB (requalified) — rubredoxin RubB rubB glgE (requalified) — alpha-1,4-glucan:maltose-1-phosphate maltosyltrans glgE treS (requalified) — maltose alpha-D-glucosyltransferase treS aglA (family_assigned) — glycoside hydrolase family 13 protein aglA Rv3254 (requalified) — oxidoreductase Rv3254 alkB (requalified) — alkane 1-monooxygenase alkB pirG (requalified) — exported repetitive protein pirG

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.