MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3304 · 46 genes shown · anchor lpdA · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3304 (requalified) — gamma-glutamylcyclotransferase Rv3304 lpdA (requalified) — NAD(P)H-quinone dehydrogenase lpdA glpD2 (requalified) — glycerol-3-phosphate dehydrogenase/oxidase glpD2 Rv3231c (family_assigned) — hypothetical protein Rv3231c Rv3916c (requalified) — acetyltransferase Rv3916c Rv3118 (family_assigned) — hypothetical protein Rv3118 Rv0814c (family_assigned) — DUF1416 domain-containing protein Rv0814c Rv1332 (family_assigned) — transcriptional regulator Rv1332 Rv0051 (family_assigned) — glycosyltransferase family 87 protein Rv0051 pimE (requalified) — mannosyltransferase pimE Rv2181 (requalified) — alpha-(1-2)-phosphatidylinositol mannoside mannosy Rv2181 priA (family_assigned) — primosomal protein N' priA Rv3604c (dark) — DUF6779 domain-containing protein Rv3604c Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c bkdB (family_assigned) — 3-methyl-2-oxobutanoate dehydrogenase subunit beta bkdB bkdC (family_assigned) — dihydrolipoamide acetyltransferase family protein bkdC dlaT (requalified) — 2-oxoglutarate dehydrogenase%2C E2 component%2C di dlaT bkdA (family_assigned) — pyruvate dehydrogenase (acetyl-transferring) E1 co bkdA glpK (requalified) — glycerol kinase GlpK glpK glpD1 (requalified) — glycerol-3-phosphate dehydrogenase/oxidase glpD1 gpdA2 (requalified) — NAD(P)H-dependent glycerol-3-phosphate dehydrogena gpdA2 gpdA1 (requalified) — NAD(P)H-dependent glycerol-3-phosphate dehydrogena gpdA1 plsB2 (requalified) — glycerol-3-phosphate 1-O-acyltransferase plsB2 ppk2 (requalified) — polyphosphate kinase ppk2 Rv2170 (requalified) — N-acetyltransferase Rv2170 Rv3230c (requalified) — NADPH oxidoreductase Rv3230c Rv3233c (family_assigned) — Possible triacylglycerol synthase (diacylglycerol Rv3233c tgs3 (requalified) — diacyglycerol O-acyltransferase tgs3 Rv0948c (requalified) — chorismate mutase Rv0948c Rv0474 (family_assigned) — helix-turn-helix transcriptional regulator Rv0474 Rv0857 (family_assigned) — hypothetical protein Rv0857 Rv0854 (family_assigned) — SRPBCC family protein Rv0854 parA (requalified) — chromosome partitioning protein ParA parA cysA3 (requalified) — thiosulfate sulfurtransferase cysA3 cysA2 (requalified) — sulfurtransferase cysA2 Rv2844 (family_assigned) — ferritin-like domain-containing protein Rv2844 moaE1 (family_assigned) — molybdopterin synthase catalytic subunit 1 moaE1 Rv3120 (requalified) — class I SAM-dependent methyltransferase Rv3120 Rv2468c (requalified) — hypothetical protein Rv2468c Rv2365c (requalified) — cytidine deaminase Rv2365c mec (requalified) — CysO-cysteine peptidase mec clpS (requalified) — ATP-dependent Clp protease adapter ClpS clpS Rv1333 (family_assigned) — P1 family peptidase Rv1333 Rv1337 (family_assigned) — rhomboid family intramembrane serine protease Rv1337 cysM (requalified) — O-phosphoserine sulfhydrylase cysM cysO (requalified) — sulfur carrier protein CysO cysO

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.