MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3300c · 46 genes shown · anchor atsB · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3300c (family_assigned) — RluA family pseudouridine synthase Rv3300c atsB (requalified) — arylsulfatase AtsB atsB phoY1 (requalified) — phosphate signaling complex protein PhoU phoY1 rsfS (requalified) — ribosome silencing factor rsfS rplU (requalified) — 50S ribosomal protein L21 rplU rplQ (requalified) — 50S ribosomal protein L17 rplQ rplM (requalified) — 50S ribosomal protein L13 rplM rplO (requalified) — 50S ribosomal protein L15 rplO rplK (requalified) — 50S ribosomal protein L11 rplK rplC (requalified) — 50S ribosomal protein L3 rplC rplN (requalified) — 50S ribosomal protein L14 rplN rplX (requalified) — 50S ribosomal protein L24 rplX glpD2 (requalified) — glycerol-3-phosphate dehydrogenase/oxidase glpD2 Rv0712 (family_assigned) — formylglycine-generating enzyme family protein Rv0712 lpqC (family_assigned) — PHB depolymerase family esterase lpqC Rv3493c (requalified) — mammalian cell entry protein Rv3493c phoT (family_assigned) — phosphate ABC transporter ATP-binding protein PstB phoT pstA1 (family_assigned) — phosphate ABC transporter permease PstA pstA1 pstA2 (family_assigned) — phosphate ABC transporter permease PstA pstA2 pstB (family_assigned) — phosphate ABC transporter ATP-binding protein pstB Rv0178 (requalified) — Mce associated membrane protein Rv0178 nadD (requalified) — nicotinate-nucleotide adenylyltransferase nadD rplS (requalified) — 50S ribosomal protein L19 rplS rpmA (requalified) — 50S ribosomal protein L27 rpmA rpmG2 (requalified) — 50S ribosomal protein L33 rpmG2 rplY (requalified) — 50S ribosomal protein L25/general stress protein C rplY rpmE (requalified) — 50S ribosomal protein L31 rpmE rplR (requalified) — 50S ribosomal protein L18 rplR rplV (requalified) — 50S ribosomal protein L22 rplV rpsK (requalified) — 30S ribosomal protein S11 rpsK rpsJ (requalified) — 30S ribosomal protein S10 rpsJ rpmF (requalified) — 50S ribosomal protein L32 rpmF rpsI (requalified) — 30S ribosomal protein S9 rpsI rpsM (requalified) — 30S ribosomal protein S13 rpsM rpsP (requalified) — 30S ribosomal protein S16 rpsP rpmI (requalified) — 50S ribosomal protein L35 rpmI rplJ (requalified) — 50S ribosomal protein L10 rplJ rpsF (requalified) — 30S ribosomal protein S6 rpsF Rv0500B (family_assigned) — Conserved hypothetical protein Rv0500B rplA (requalified) — 50S ribosomal protein L1 rplA rplF (requalified) — 50S ribosomal protein L6 rplF rplD (requalified) — 50S ribosomal protein L4 rplD rpmD (requalified) — 50S ribosomal protein L30 rpmD rplI (requalified) — 50S ribosomal protein L9 rplI glpK (requalified) — glycerol kinase GlpK glpK lpdA (requalified) — NAD(P)H-quinone dehydrogenase lpdA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.